SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene65439

Length: 600 nt

Origin of reads: Biogeco_1 Biogeco_2

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene65439

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	DNA-damage repair protein drt111, putative; K12840 splicing factor 45	-	-	84%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	28%
Blast2go	protein	-	-	87%

Source	GOs	Term	Type	Identity
Blast2go	DNA repair	GO:0006281	Biological Process	87%
Blast2go	cytoplasm	GO:0005737	Cellular Component	87%
Blast2go	nucleus	GO:0005634	Cellular Component	87%

Source	InterPros	Term	Type	Identity
Blast2go	RNA recognition motif domain	IPR000504	-	87%
Blast2go	RNA recognition motif domain, eukaryote	IPR003954	-	87%
Blast2go	Nucleotide-binding, alpha-beta plait	IPR012677	-	87%

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
329		33		66	0.997467

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain