SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene64759

Length: 319 nt

Origin of reads: Biogeco_1 Uagpf

UniGene Fasta

>sp_v1.1_unigene64759
CGTCGTGACCTTGGCTGTCACTCAATGTTGGTGGGTCACCAGGAAAGATTGATCTCTATGTTGGAAAGGAAGTTGTCAAAAGAGGTATAGCAATGGAGCAAGCATGTGATGCTTTAATTCAGTTGATTAAGGACTATGGGCGATGGGTCGATCCTCCTGCTGAAGAATAATTTGGGACTGCTGCCCATCTTAAATGTTTCAGTCAAGCTATTTAACATATCAGCATCGTAAGTACAACCTGTGTTAGAAGGCAACAAATTACAGAGGGAATCACTGGCTCTAGATTAGTGTATGGTTCTCCTGGAGCTATGGGTTTGTT

Ace file of the UniGene sp_v1.1_unigene64759

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	(E)-4-hydroxy-3-methyl-but-2-enyl diphosphate synthase n=1 Tax=Ginkgo biloba RepID=A9CBE3_GINBI	-	-	2.0e-17	91%
FL-Next	tr=(E)-4-hydroxy-3-methyl-but-2-enyl diphosphate synthase; Ginkgo biloba (Ginkgo) (Maidenhair tree).	-	-	0.0	91%
Blast2go	1-hydroxy-2-methyl-2- -butenyl 4-diphosphate synthase	-	-	3.42643e-17	90%

Source	GOs	Term	Type	e value	Identity
Blast2go	cellular metabolic process	GO:0044237	Biological Process	3.42643e-17	90%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: A9CBE3

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 56 - 741

Fln protein: S*PWLSLNVGGSPGKIDLYVGKEVVKRGIAMEQACDALIQLIKDYGRWVDPPAEE*

Protein Length: 57

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATGTTGGTGGGTCACCAGGAAAGATTGATCTCTATGTTGGAAAGGAAGTTGTCAAAAGAGGTATAGCAATGGAGCAAGCATGTGATGCTTTAATTCAGTTGATTAAGGACTATGGGCGATGGGTCGATCCTCCTGCTGAAGAATAA___TTTGGGACTGCTGCCCATCTTAAATGTTTCAGTCAAGCTATTTAACATATCAGCATCGTAAGTACAACCTGTGTTAGAAGGCAACAAATTACAGAGGGAATCACTGGCTCTAGATTAGTGTATGGTTCTCCTGGAGCTATGGGTTTGTT

Fln Alignment:

sp_v1.1_unigene64759___VGGSPGKIDLYVGKEVVKRGIAMEQACDALIQLIKDYGRWVDPPAEE
A9CBE3_______________VGGSPGKIDLYVGKEVVKRGIAMDQATDALIQLIKDHGRWVDPPVEE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain