SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene64469

Length: 829 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene64469

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PGAM domain containing protein	-	-	4.0e-19	26%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	67%
Blast2go	protein	-	-	0.0	68%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Phosphoglycerate/bisphosphoglycerate mutase, active site	IPR001345	-	0.0	68%
Blast2go	Histidine phosphatase superfamily, clade-1	IPR013078	-	0.0	68%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NPK4

Fln msg: Separated hits, possible frame ERROR between 170 and 173, Distance to subject end: 54 aas, your sequence is shorter than subject: 257 - 317

Fln protein: MRSLFPNLASTRYSYPWIEPLESSSESPACSKYTIKxxESRVRIPKRGRDFQNFLLIRSMESSSKKEPFVQNLFVMRHGERMDNYDSEWIRSAQRPWDPPLTDGGKKEARETGERLRTQGWNITRVICSPFLRCVQTAAEVVTALCAVQDDRLAIDPSKVKVSIEYGLCEVMNYIAIRTPPSSPDISWTIDRSELEAILPAGTVDHSVEPVWSELPHWPEKTEKAHERYSKTIQALADKFPRENVLCVTHGEGVGVS

Protein Length: 258

Fln nts: ATGGGGAGATATAAAAGGGCCGAATATAAATTGGGTATAATTTTAATAATTTGTCTGCT_-_ATGCGAAGTCTGTTTCCCAATCTGGCCAGTACACGATATTCCTACCCTTGGATCGAACCTTTGGAGTCTTCCTCTGAATCTCCTGCCTGCAGCAAGTACACTATCAAGCAxxxGGAGTCCAGGGTTCGAATCCCCAAACGAGGCAGAGATTTTCAAAATTTTCTCTTGATTCGCAGCATGGAATCCAGTAGCAAGAAAGAGCCATTCGTGCAGAATTTATTCGTGATGAGGCATGGAGAAAGGATGGACAATTACGATTCGGAGTGGATTCGCTCGGCACAGAGGCCCTGGGATCCTCCATTGACCGACGGTGGCAAAAAAGAGGCTCGGGAGACGGGCGAAAGGCTGAGAACGCAGGGGTGGAATATAACTAGGGTGATCTGTTCCCCGTTCTTGCGTTGTGTTCAGACTGCGGCCGAGGTCGTTACAGCTCTCTGCGCTGTGCAGGATGACCGCCTTGCCATCGATCCTTCTAAGGTCAAGGTGTCAATAGAATATGGTTTGTGTGAGGTAATGAATTACATTGCGATAAGAACCCCGCCTTCTTCACCAGACATTAGCTGGACAATTGACCGTTCTGAACTGGAAGCTATTTTACCAGCTGGAACGGTGGACCATTCTGTAGAGCCTGTATGGTCAGAGCTGCCCCATTGGCCAGAGAAAACTGAAAAAGCACATGAGAGATACTCAAAAACGATTCAAGCACTGGCAGATAAATTTCCACGAGAGAATGTTCTATGTGTTACTCATGGTGAAGGTGTTGGAGTTTCA

Fln Alignment:

sp_v1.1_unigene64469___MRSLFPNLASTRYSYPWIEPLESSSESPACSKYTIKQxESRVRIPKRGRDFQNFLLIR------SMESSSKKEPFVQNLFVMRHGERMDNYDSEWIRSAQRPWDPPLTDGGKKEARETGERLRTQGWNITRVICSPFLRCVQTAAEVVTALCAVQDDRLAIDPSKVKVSIEYGLCEVMNYIAIRTPPSSPDISWTIDRSELEAILPAGTVDHSVEPVWSELPHWPEKTEKAHERYSKTIQALADKFPRENVLCVTHGEGVGVS
A9NPK4_______________MRSVFPNLARTRYSHLWIEPLKSHSHSNTCNKYYIKRxESRVRILEQGYNFSKFSLIRGIVVIRSMESSSKKGPFVQNLFVMRHGERMDNYDPEWIASAPRPWDPPLTDDGKKEARKTGERLRTQGWNITRVICSPFLRCIQTAAEVVTALCAVQDQPLAIDPSKVKVSIEYGLCEVMNQFAIRTPPSSPDISWTLDRSELEAILPAGTMDHSVEPVWPELPHWLEKTEKSHERYSKAIQALADKFPRENVLCVTHGEGVGVS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain