SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene64315

Length: 675 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene64315

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Beta-ketoacyl-ACP synthase II n=1 Tax=Perilla frutescens RepID=O48943_PERFR	-	-	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	beta-ketoacyl-acp synthase ii	-	-	89%

Source	ECs	Term	Type	e value	Identity
Blast2go	Beta-ketoacyl-acyl-carrier-protein synthase I.	EC:2.3.1.41	-	0.0	89%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Fatty acid biosynthesis	00061		0.0	89%
Blast2go	Metabolic pathways	01100		0.0	89%

Source	GOs	Term	Type	e value	Identity
Blast2go	fatty acid biosynthetic process	GO:0006633	Biological Process	0.0	89%
Blast2go	3-oxoacyl-[acyl-carrier-protein] synthase activity	GO:0004315	Molecular Function	0.0	89%

Source	InterPros	Term	Type	Identity
Blast2go	Beta-ketoacyl synthase	IPR000794	-	89%
Blast2go	Beta-ketoacyl synthase, C-terminal	IPR014031	-	89%
Blast2go	Thiolase-like, subgroup	IPR016038	-	89%
Blast2go	Thiolase-like	IPR016039	-	89%

Full-Lengther Next Prediction

SNPs (tot: 4)

Position	A %	C %	T %	Probability
400	90	10		0.90298
402	90	10		0.90298
404		10	90	0.90298
405	10	90		0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain