SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene64313

Length: 1103 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene64313

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Hydroxyphenylpyruvate reductase (HPPR) n=1 Tax=Solenostemon scutellarioides RepID=Q65CJ7_SOLSC	-	-	60%
FL-Next	tr=Hydroxyphenylpyruvate reductase (HPPR); Solenostemon scutellarioides (Coleus) (Coleus blumei).	-	-	66%
Blast2go	hydroxyphenylpyruvate reductase	-	-	78%

Source	GOs	Term	Type	e value	Identity
Blast2go	catalytic activity	GO:0003824	Molecular Function	0.0	78%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: tr_plants

Fln subject: Q65CJ7

Fln msg: atg_distance in limit (1-15): atg_distance = 7,

Fln protein: MTQSMMPYLLDTLESKFTVYRLWEANNPEAFVAEHSNSIHAVVGATAVGASAELIDSLPKLEIVSTYSVGLDKVDLAKCKERKIVVTNTPDVLTDDVADLAIGLALATLRQICAADRYVRQGSWLKGEYKLTTKLSGKNIGIIGLGRIGLAIAKRAEGFGCNIAYYSRSRKSDSTYTYYSSVMDLAASSDVLVVACPLTRETRHIIDRSVLDALGPKAILVNIGRGPLVDEKELVKALVEARLGGAGLDVFENEPDVPIELFDMDNVVLVPHVGSATWETRKVMADVVIGNLEAYFSNKPLLTPVE*

Protein Length: 308

Fln nts: ATTG_-_ATGACACAGTCAATGATGCCATATCTGCTGGACACCTTGGAAAGCAAGTTCACAGTCTATAGATTGTGGGAAGCCAATAACCCAGAGGCTTTTGTGGCCGAGCACAGCAATTCAATACACGCAGTGGTGGGTGCTACAGCAGTGGGTGCCAGCGCAGAGCTGATTGATTCACTTCCCAAGTTGGAGATTGTCTCCACATATAGCGTGGGCCTGGACAAGGTGGATTTGGCCAAATGCAAGGAGAGGAAGATAGTCGTTACCAATACTCCCGATGTTTTGACCGATGATGTGGCGGATTTAGCCATAGGTTTAGCGCTTGCCACTCTACGTCAGATTTGCGCTGCTGATCGATATGTGAGACAAGGATCATGGTTGAAAGGAGAATACAAGCTCACCACCAAGCTCAGTGGAAAGAACATTGGGATAATTGGGCTTGGTCGCATTGGCTTAGCTATTGCTAAGAGGGCGGAAGGTTTTGGGTGTAACATTGCATACTACTCAAGGTCTAGGAAGTCTGACAGTACTTACACCTACTATTCTAGTGTTATGGACCTTGCAGCAAGCAGTGATGTTCTTGTAGTAGCCTGCCCTTTAACAAGAGAAACTCGGCATATCATTGATCGGAGTGTTCTTGATGCATTGGGACCAAAGGCAATCCTTGTGAATATAGGCCGTGGCCCCCTTGTAGATGAGAAAGAGCTTGTTAAGGCTTTAGTAGAAGCTCGTCTTGGAGGTGCTGGACTTGATGTATTTGAAAATGAGCCTGATGTGCCGATTGAGCTTTTTGACATGGATAATGTGGTTTTGGTGCCACATGTTGGCAGTGCAACCTGGGAAACGAGGAAGGTGATGGCAGATGTTGTGATTGGCAACTTGGAGGCCTACTTTTCAAATAAACCATTATTAACACCTGTGGAATGA___AGAATAAGTCCCTGTAAAAAATGCTTTTGATGATGTTGCTGTTATTCTTTCAAGTTCATATAACTCAGCACATTTATATGTAAGATTTCTTAAAATGAAGGTGATGCCCACTTGGGATTGATATGCTTATGGATTTTCTTACATGTGCCAAAAACCAAAACTGAAATGCAAATGAAAG

Fln Alignment:

sp_v1.1_unigene64313___LMTQSMMPYLLDTLESKFTVYRLWEANNPEAFVAEHSNSIHXXXXXXXXXXXXELIDSLPKLEIVSTYSVGLDKVDLAKCKERKIVVTNTPDVLTDDVADLAIGLALATLRQICAADRYVRQGSWLKGEYKLTTKLSXXXXXXXXXXXXXXXXXXRAEGFGCNIAYYSRSRKSDSTYTYYSSVMDLAASSDVLVVACPLTRETRHIIDRSVLDALGPKAILVNIGRGPLVDEKELVKALVEARLGGAGLDVFENEPDVPIELFDMDNVVLVPHVGSATWETRKVMADVVIGNLEAYFSNKPLLTPV
Q65CJ7_______________LMMCPMSTYLEQELDKRFKLFRYWTQPAQRDFLALQAESIRAVVGNSNAGADAELIDALPKLEIVSSFSVGLDKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGTVETRKVMADLVVGNLEAHFSGKPLLTPV

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
509	80		20		0.995493
510	80			20	0.995493
512	20		80		0.995493
513		20		80	0.995493
516	80			20	0.995493
519	80	20			0.995493
1077	33			66	0.997457
1078	33			66	0.997461

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain