SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene64151

Length: 343 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene64151
TGGGCCCCGGAATAATTGGCGGGTTGCTTCTACCTATCGTCGGAGCCTTCTCCGACGTCGTGCTGATCGCTGTGTCTGGTCTATCTGGAAGTAAGGCCACTGCACAATCACAAGTGCTTATTGGAATGGGGTTGCTTGCGGGTTCGACTGTAATGTTATTGACAATGTTGTGGGGATCGTGTATAATTATCGGCAAACGTGACCTCCCTCTAGAGGGTGATGCCATTGATGGCCAGGATACTAAAGGATTCAACCTTCATGGTGCAGGTGTTACTACAGATAAAGCAACTTCTAAGTGTGCACAAATTATGGTGGCGTCACTCATACGTTTCATTATTGTAGA

Ace file of the UniGene sp_v1.1_unigene64151

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice).	-	-	0.0	66%
Blast2go	drought-induced protein rdi	-	-	1.34708e-29	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	plant-type vacuole	GO:0000325	Cellular Component	1.34708e-29	77%
Blast2go	plasma membrane	GO:0005886	Cellular Component	1.34708e-29	77%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	1.34708e-29	77%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A2YMQ9

Fln msg: Distance to subject end: 280 aas, your sequence is shorter than subject: 113 - 502

Fln protein: GPGIIGGLLLPIVGAFSDVVLIAVSGLSGSKATAQSQVLIGMGLLAGSTVMLLTMLWGSCIIIGKRDLPLEGDAIDGQDTKGFNLHGAGVTTDKATSKCAQIMVASLIRFIIV

Protein Length: 114

Fln nts: TGGGCCCCGGAATAATTGGCGGGTTGCTTCTACCTATCGTCGGAGCCTTCTCCGACGTCGTGCTGATCGCTGTGTCTGGTCTATCTGGAAGTAAGGCCACTGCACAATCACAAGTGCTTATTGGAATGGGGTTGCTTGCGGGTTCGACTGTAATGTTATTGACAATGTTGTGGGGATCGTGTATAATTATCGGCAAACGTGACCTCCCTCTAGAGGGTGATGCCATTGATGGCCAGGATACTAAAGGATTCAACCTTCATGGTGCAGGTGTTACTACAGATAAAGCAACTTCTAAGTGTGCACAAATTATGGTGGCGTCACTCATACGTTTCATTATTGTAGA

Fln Alignment:

sp_v1.1_unigene64151___VGAFSDVVLIAVSGLSGSKATAQSQVLIGMGLLAGSTVMLLTMLWGSCIIIGKRDLPLEGDAIDGQDTKGFNLHGAGVTTDKATSKCAQIMVASLIRFIIV
A2YMQ9_______________LGALPDALLILVSGLSGTKEVAQSQVLIGMGLLAGSTVMLLTLLWGSCVVVGKCDLSENSTAIDSRDTKGFSLLGSGVSTDKQTSYAARIMAISILPFIIV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain