SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene64130

Length: 385 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene64130
ATGGGGTACATGCGATCAGTCATAGATTTGATGGAGTTGAGAGGGCACCCTCTCTTCACAGTGGTGGGCACCTATGCGGTCTCGGACTGTACTAAGATCGGGTTTGGAGATGTGGATTTGGGGTGGGGAAGGGCAGCCTACGGCGGGCCAGCACGAGGTGGAGTGGGACCAGCGTCAGTGCCGGGGTTGATAAGCTTCCTCGTCCCCTATCATAACAGAAGTGGGGTGGAAGGCATAGTGGTTCCAGTATGCATGCCGCCCGCTGCTATGCAAATATTTCAAGCAGAAATCAATGAAGCTATTGAGAACGCAGCTCCATATCTACGATCCTCGATATAAAATAGCAATCTCTAAGCTTAATTATATTAAGTTGCTGTTACTTGAA

Ace file of the UniGene sp_v1.1_unigene64130

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	10-deacetylbaccatin III 10-O-acetyltransferase n=2 Tax=Andropogoneae RepID=B6UF78_MAIZE	-	-	3.0e-13	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	54%
Blast2go	10-deacetylbaccatin iii 10-o-acetyltransferase	-	-	3.98065e-18	60%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Transferase	IPR003480	-	3.98065e-18	60%
Blast2go	Chloramphenicol acetyltransferase-like domain	IPR023213	-	3.98065e-18	60%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LLR5

Fln msg: your sequence is shorter than subject: 113 - 448

Fln protein: MGYMRSVIDLMELRGHPLFTVVGTYAVSDCTKIGFGDVDLGWGRAAYGGPARGGVGPASVPGLISFLVPYHNRSGVEGIVVPVCMPPAAMQIFQAEINEAIENAAPYLRSSI*

Protein Length: 114

Fln nts: ATGGGGTACATGCGATCAGTCATAGATTTGATGGAGTTGAGAGGGCACCCTCTCTTCACAGTGGTGGGCACCTATGCGGTCTCGGACTGTACTAAGATCGGGTTTGGAGATGTGGATTTGGGGTGGGGAAGGGCAGCCTACGGCGGGCCAGCACGAGGTGGAGTGGGACCAGCGTCAGTGCCGGGGTTGATAAGCTTCCTCGTCCCCTATCATAACAGAAGTGGGGTGGAAGGCATAGTGGTTCCAGTATGCATGCCGCCCGCTGCTATGCAAATATTTCAAGCAGAAATCAATGAAGCTATTGAGAACGCAGCTCCATATCTACGATCCTCGATATAA___AATAGCAATCTCTAAGCTTAATTATATTAAGTTGCTGTTACTTGAA

Fln Alignment:

sp_v1.1_unigene64130___YMRSVIDLMELRGHPLFTVVGTYAVSDCTKIGFGDVDLXXXXXXXXXXXXXXXXXXXXXXLISFLVPYHNRSGVEGIVVPVCMPPAAMQIFQ-XXXXXXXXXXXPYLRSSI
B8LLR5_______________YMRSVIDLMELEGRPHFTVVGSFLVSDVTKIGFGDVDF--GWGRAAYGGPAKGGVGAVPGVSSFFIPLRNTSGVEGILVPVCLPSAAMKIFQAEISEATEKYAPPFLHSSL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain