SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene64053

Length: 293 nt

UniGene Fasta

>sp_v1.1_unigene64053
AAGAAACAGTGGACGCTTTTAGGTTGGATGCGCTTGTTGAGTCACATCCTATTGAGGTGGAGGTGGGTCATGCTCGTGAACTTAATGAAATTTTTGATGCTATAAGCTACAAAAAGGGAGCTTCTATTATCCGTATGCTTGAAAGTTACATTGGAGCTCAGGTTTTTAAGAAAGGCCTGAACTCTTACATCAAGAGGTACGCTTGGAAAAATGCAAAGACTGAAGATTTATGGGCAGTCCTTTCAGAAGAGTCAAGAGAACCAGTGAATGAGCTAATGGACTCATGGACAAAG

Ace file of the UniGene sp_v1.1_unigene64053

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	APM1; APM1 (AMINOPEPTIDASE M1); aminopeptidase; K08776 puromycin-sensitive aminopeptidase [EC:3.4.11.-]	-	-	4.0e-32	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	86%
Blast2go	protein	-	-	1.79927e-42	84%

Source	ECs	Term	Type	e value	Identity
Blast2go	Hydrolases, Acting on peptide bonds (peptide hydrolases), Aminopeptidases.	EC:3.4.11.-	-	1.79927e-42	84%

Source	ECs	Term	Type	e value	Identity
AutoFact	Hydrolases, Acting on peptide bonds (peptide hydrolases), Aminopeptidases.	EC:3.4.11.-	-	4.0e-32	68%

Source	GOs	Term	Type	e value	Identity
Blast2go	aminopeptidase activity	GO:0004177	Molecular Function	1.79927e-42	84%
Blast2go	plasma membrane	GO:0005886	Cellular Component	1.79927e-42	84%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase	IPR001930	-	1.79927e-42	84%
Blast2go	Peptidase M1, membrane alanine aminopeptidase, N-terminal	IPR014782	-	1.79927e-42	84%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LKB8

Fln msg: Distance to subject end: 367 aas, your sequence is shorter than subject: 97 - 818

Fln protein: ETVDAFRLDALVESHPIEVEVGHARELNEIFDAISYKKGASIIRMLESYIGAQVFKKGLNSYIKRYAWKNAKTEDLWAVLSEESREPVNELMDSWTK

Protein Length: 98

Fln nts: AAGAAACAGTGGACGCTTTTAGGTTGGATGCGCTTGTTGAGTCACATCCTATTGAGGTGGAGGTGGGTCATGCTCGTGAACTTAATGAAATTTTTGATGCTATAAGCTACAAAAAGGGAGCTTCTATTATCCGTATGCTTGAAAGTTACATTGGAGCTCAGGTTTTTAAGAAAGGCCTGAACTCTTACATCAAGAGGTACGCTTGGAAAAATGCAAAGACTGAAGATTTATGGGCAGTCCTTTCAGAAGAGTCAAGAGAACCAGTGAATGAGCTAATGGACTCATGGACAAAG

Fln Alignment:

sp_v1.1_unigene64053___ETVDAFRLDALVESHPIEVEVGHARELNEIFDAISYKKGASIIRMLESYIGAQVFKKGLNSYIKRYAWKNAKTEDLWAVLSEESREPVNELMDSWTK
B8LKB8_______________QTVDAFRLDGLVGSHPIEVEVGHAREIDEIFDAISYRKGASIIRMLESYIGASVFQKGLNAYVKRYAWKNARTEDLWAVLSEESGESVNELMDSWTK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain