SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene63989

Length: 440 nt

UniGene Fasta

>sp_v1.1_unigene63989
AAGAATATTATCATTAATTGGTCTTTTGGGTTATTATTTGTCAACATTTTCAATGGGCATGGGTGGAATTCCATGGGTTTTAATGTCTGAGATATTTCCTTTGAATATGAAGCGTATTGCTGGCAGTCTGGTGTCTCTCACAGCTTGGTTTGGTTCATGGATTGTCACCCTCACTTTTAATTCTCTCTTCTCTTGGAGTTCTACAGCTTCCTTCTTTATATTTTGCATTGTCTGCGCCTTCACTGTGCTATTCGTGGTAAAGCTTGTACCAGAGACAAAGGGACAACTCTAGAAGAAATACAATCTTCTCTCTCATAAAATTCTAGGGGAAGAAATCGGAAGTTTGTCCATAGAATCATGGCTTGGTTGAATTTTATGGTTTGCAATGAAGTTCTCATGAAGAGTCTGTAATTCATTACAAACAATATTCTCTTTACTAA

Ace file of the UniGene sp_v1.1_unigene63989

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ERD sugar transporter-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZF13_PICSI	-	-	1.0e-27	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	erd sugar transporter-like protein	-	-	1.10373e-36	80%

Source	InterPros	Term	Type	e value	Identity
Blast2go	General substrate transporter	IPR005828	-	1.10373e-36	80%
Blast2go	Major facilitator superfamily domain, general substrate transporter	IPR016196	-	1.10373e-36	80%
Blast2go	Major facilitator superfamily domain	IPR020846	-	1.10373e-36	80%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NXP9

Fln msg: your sequence is shorter than subject: 97 - 388

Fln protein: RILSLIGLLGYYLSTFSMGMGGIPWVLMSEIFPLNMKRIAGSLVSLTAWFGSWIVTLTFNSLFSWSSTASFFIFCIVCAFTVLFVVKLVPETKGQL*

Protein Length: 98

Fln nts: AAGAATATTATCATTAATTGGTCTTTTGGGTTATTATTTGTCAACATTTTCAATGGGCATGGGTGGAATTCCATGGGTTTTAATGTCTGAGATATTTCCTTTGAATATGAAGCGTATTGCTGGCAGTCTGGTGTCTCTCACAGCTTGGTTTGGTTCATGGATTGTCACCCTCACTTTTAATTCTCTCTTCTCTTGGAGTTCTACAGCTTCCTTCTTTATATTTTGCATTGTCTGCGCCTTCACTGTGCTATTCGTGGTAAAGCTTGTACCAGAGACAAAGGGACAACTCTAG___AAGAAATACAATCTTCTCTCTCATAAAATTCTAGGGGAAGAAATCGGAAGTTTGTCCATAGAATCATGGCTTGGTTGAATTTTATGGTTTGCAATGAAGTTCTCATGAAGAGTCTGTAATTCATTACAAACAATATTCTCTTTACTAA

Fln Alignment:

sp_v1.1_unigene63989___TFSMGMGGIPWVLMSEIFPLNMKRIAGSLVSLTAWFGSWIVTLTFNSLFSWSSTASFFIFCIVCAFTVLFVVKLVPETKGQ
A9NXP9_______________TFSIGMGGIPWVIMSEIFPLNMKRIAGSLVSLTAWLGSWIVTLTFNSLFSWSDAACFFIFCVVCAFTVLFVVKLVPETKGR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain