SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene63929

Length: 487 nt

UniGene Fasta

>sp_v1.1_unigene63929
ATGGGGAGGATCGAGTCTCGTTAGCTTCGTTAGCTTCCTTTTCTTATAATCGCTTCTATTTTGGCTCTGAGCAATTTGGGAACATGGCAGATAACCAGCGAGTGCACCCCACGACAGTAGATTTAGAGAAAAACGCAGGCGAATATGAAAACCAAAAGCCGAGCGCTCCCTTGATACCCAAGTCTAGTCTTTCGTCTGAAAAGAGCGAGATTTTTCCCGTGCCCGCTTATCCTCCTTCCGGCGGGCAGCCAACTGATCAGTTTTCAAGAGACCCAGTCATCTCCAGGCGAGAGCTTCCCAAATACTACTCACCGCCTCCCAAGCGCCGGAGCTCCTGTTGCCGCTGCTTGTGCTGCACGATTTGCTTTCTATTCGCGCTCGTCGCGGCCATCGCCATTACCTGTGGCATTCTGTACTTGGTATTCCAGCCGAGAATCCCCAAATACTCCGTCGACAGCATCCAGATCGCCAACTTCAGCATCAACTC

Ace file of the UniGene sp_v1.1_unigene63929

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	harpin-induced protein-related / HIN1-related / harpin-responsive protein-related	-	-	3.0e-09	29%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	73%
Blast2go	unknown [Picea sitchensis]	-	-	4.29009e-36	82%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NWB5

Fln msg: Distance to subject end: 138 aas, your sequence is shorter than subject: 134 - 268

Fln protein: MADNQRVHPTTVDLEKNAGEYENQKPSAPLIPKSSLSSEKSEIFPVPAYPPSGGQPTDQFSRDPVISRRELPKYYSPPPKRRSSCCRCLCCTICFLFALVAAIAITCGILYLVFQPRIPKYSVDSIQIANFSIN

Protein Length: 135

Fln nts: ATGGGGAGGATCGAGTCTCGTTAGCTTCGTTAGCTTCCTTTTCTTATAATCGCTTCTATTTTGGCTCTGAGCAATTTGGGAAC_-_ATGGCAGATAACCAGCGAGTGCACCCCACGACAGTAGATTTAGAGAAAAACGCAGGCGAATATGAAAACCAAAAGCCGAGCGCTCCCTTGATACCCAAGTCTAGTCTTTCGTCTGAAAAGAGCGAGATTTTTCCCGTGCCCGCTTATCCTCCTTCCGGCGGGCAGCCAACTGATCAGTTTTCAAGAGACCCAGTCATCTCCAGGCGAGAGCTTCCCAAATACTACTCACCGCCTCCCAAGCGCCGGAGCTCCTGTTGCCGCTGCTTGTGCTGCACGATTTGCTTTCTATTCGCGCTCGTCGCGGCCATCGCCATTACCTGTGGCATTCTGTACTTGGTATTCCAGCCGAGAATCCCCAAATACTCCGTCGACAGCATCCAGATCGCCAACTTCAGCATCAACTC

Fln Alignment:

sp_v1.1_unigene63929___MADNQRVHPTTVDLEKNAGEYENQKPSAPLIPKSSLSSEKSEIFPVPAYPPSGGQPTDQFSRDPVISRREXXXXXXXXXXXXXXXXXXXXXTICFLFALVAAIAITCGILYLVFQPRIPKYSVDSIQIANFSIN
A9NWB5_______________MADNQRVHPTTEDVEKNAGEYENEKPSSPLVPKSSAASEKDGVDP-----PSGRQMRVQFPRDQVIPTRQIPKYYSRPPKRRNSCCRCLCYAICFLFALVAIIAITCGILYLVFEPRIPKYSIDSVRITNFSIN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain