SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene63902

Length: 453 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene63902
AGTCCACTACTTCATCAAAAGGTGTGGGAGGCTAAGACCTCCACATTACCTGATAAGGGAAGTAAGCGACATAAGACTTGAGGCAAGATTGTATTGTCATCGTGGAGGAACAACAATGTTTCCATCCTACAACGGAATGAGAGCTCGTGGATTGGGAGCACAAGAGTATGAACATCGGCAAAATGCATGCTTGTGGGCATGATGCACATGTTACTATGCTTCTTGGAGCTGCCAAATTGCTTTATAAACACAAAGATAAACTCCAGGGCACTGTAAGACTTATTTTCCAACCAGCCGAAGAAGGAGGTGCAGGTGCTGCTTACATGATTCGTGAAGGTGCACTTGGAGATGCAGAAGCTATACTTGCAATGCATGTTGCACCTAATCTGTCAACTGGGACTATAGAATCAACCCAGGACCAATTATGGCGGGTTCAGGCATTTTTGAAGCTGT

Ace file of the UniGene sp_v1.1_unigene63902

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	IAA-amino acid hydrolase ILR1, putative n=1 Tax=Ricinus communis RepID=B9S5P0_RICCO	-	-	7.0e-32	74%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	91%
Blast2go	iaa-amino acid hydrolase ilr1	-	-	4.92416e-42	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	hydrolase activity	GO:0016787	Molecular Function	4.92416e-42	80%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LMJ2

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 212 aas, your sequence is shorter than subject: 150 - 456

Fln protein: STTSSKGVGG*DLHIT**GK*AT*DLRQDCIVIVEEQQCFHPTTE*ELVDWEHKSMNIGKMHACGHDAHVTMLLGAAKLLYKHKDKLQGTVRLIFQPAEEGGAGAAYMIREGALGDAEAILAMHVAPNLSTGTIESTQDQLWRVQAFLKL

Protein Length: 151

Fln nts: AGTCCACTACTTCATCAAAAGGTGTGGGAGGCTAAGACCTCCACATTACCTGATAAGGGAAGTAAGCGACATAAGACTTGAGGCAAGATTGTATTGTCATCGTGGAGGAACAACAATGTTTCCATCCTACAACGGAATGAGAGCTCGTGGATTGGGAGCACAAGAGTATGAACATCGGCAAAATGCATGCTTGTGGGCATGATGCACATGTTACTATGCTTCTTGGAGCTGCCAAATTGCTTTATAAACACAAAGATAAACTCCAGGGCACTGTAAGACTTATTTTCCAACCAGCCGAAGAAGGAGGTGCAGGTGCTGCTTACATGATTCGTGAAGGTGCACTTGGAGATGCAGAAGCTATACTTGCAATGCATGTTGCACCTAATCTGTCAACTGGGACTATAGAATCAACCCAGGACCAATTATGGCGGGTTCAGGCATTTTTGAAGCTGT

Fln Alignment:

sp_v1.1_unigene63902___ELVDWEHKSMNIGKMHACGHDAHVTMLLGAAKLLYKHKDKLQGTVRLIFQPAEEGGAGAAYMIREGALGDAEAILAMHVAPNLSTGTIES
B8LMJ2_______________ELVDWEHKSVNIGKMHACGHDAHVTMLLGAAKLLHKHKDKLQGTVRLIFQPAEEGGAGAAHMIREGALGDAEAIFAMHVTPGLSTGAIVS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain