SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene63835

Length: 333 nt

UniGene Fasta

>sp_v1.1_unigene63835
ATGGGCTCAAAGAAGCAAGCAGTGCCCTATGTGCTGGCGGCTCCTCAGCTTGAAGGACCCAGCCAGCCAAGAGTTACTTGAAGCCACGGAACAAGAAAGGACCTTAAGAATGAGCAGGCCTCAGAATGCTCGTGTCTTTGGCTGTCTCTCTTTTGATGATATGGAAGGACGCTCAGTACTTGCACCTGCTAGACAGGCCATTGATGATAACCATCCTAATATGTGCTCTGGCAACAACAGTGGAGTAAATTTATGCACTGCAAGTCCAGGTTCAAGCCAAGTTGCTCCACAGGCTCTCAATGGTGAATCAAGTAGTGGCAATGACCTTTCCTC

Ace file of the UniGene sp_v1.1_unigene63835

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RING-H2 zinc finger protein (Fragment) n=1 Tax=Phillyrea latifolia RepID=A1IW10_9LAMI	-	-	1.0e-11	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	74%
Blast2go	rhf2a (ring-h2 group f2a) protein binding zinc ion binding	-	-	7.73191e-22	71%

Source	GOs	Term	Type	e value	Identity
Blast2go	microgametogenesis	GO:0055046	Biological Process	7.73191e-22	71%
Blast2go	regulation of cell cycle	GO:0051726	Biological Process	7.73191e-22	71%
Blast2go	megagametogenesis	GO:0009561	Biological Process	7.73191e-22	71%
Blast2go	proteolysis involved in cellular protein catabolic process	GO:0051603	Biological Process	7.73191e-22	71%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NWL0

Fln msg: Distance to subject end: 23 aas, your sequence is shorter than subject: 110 - 422

Fln protein: WAQRSKQCPMCWRLLSLKDPASQELLEATEQERTLRMSRPQNARVFGCLSFDDMEGRSVLAPARQAIDDNHPNMCSGNNSGVNLCTASPGSSQVAPQALNGESSSGNDLS

Protein Length: 111

Fln nts: ATGGGCTCAAAGAAGCAAGCAGTGCCCTATGTGCTGGCGGCTCCTCAGCTTGAAGGACCCAGCCAGCCAAGAGTTACTTGAAGCCACGGAACAAGAAAGGACCTTAAGAATGAGCAGGCCTCAGAATGCTCGTGTCTTTGGCTGTCTCTCTTTTGATGATATGGAAGGACGCTCAGTACTTGCACCTGCTAGACAGGCCATTGATGATAACCATCCTAATATGTGCTCTGGCAACAACAGTGGAGTAAATTTATGCACTGCAAGTCCAGGTTCAAGCCAAGTTGCTCCACAGGCTCTCAATGGTGAATCAAGTAGTGGCAATGACCTTTCCTC

Fln Alignment:

sp_v1.1_unigene63835___WAQRSKQCPMCWRLLSLKDPASQELLEATEQERTLRMSRPQNARVFGCLSFDDMEGRSV
A9NWL0_______________WAQRSKQCPMCWQFLSLKDPASQELLEAVEQERTLRMNRPQNAPIFPHISFEDLDLHNV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain