SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene63455

Length: 456 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene63455
CTTCCCGTCTCCACTGGTGGCAGACTTGGCAGATCGGACCGCAGAGTGTCCGGAATTGGGTCCGATCGGGGATCTCCTCACCTCTTCTTCCACCGTTCGAATCACCGCATCAGTATTGGTGATTCAGCAACACGATGTCATTCATAAGGATGAGGTAGCCTTTTCCAAAACCTCATCCCCCCAATTTGGTGACCTGAGCTGCCACGACATCGAAACTGAATGAGAAGCCAATATGGTCGTTCCTGCCGAGATTCCCTTACCCGTCGAAGTATTTTAAGTTGCGTCTTTCTTATTAAATATTTTGAAGTAGCCAACCAGTCGAGAAAGGTTAATCCTTTCATTGTAAAGTGCTGAATCCCAAGTATAAAGGCCAACTCATTTTCTCACAACCCTGCTTGCTAGTTTTCCTTTATTGTAAAGTGCTGAATCCAAGTATGTAATGTATTGAGCATTGGC

Ace file of the UniGene sp_v1.1_unigene63455

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	sp=Cation/H(+) antiporter 20; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	53%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: Q9M353

Fln msg: your sequence is shorter than subject: 74 - 842

Fln protein: FPSPLVADLADRTAECPELGPIGDLLTSSSTVRITASVLVIQQHDVIHKDEVAFSKTSSPQFGDLSCHDIETE*

Protein Length: 75

Fln nts: CTTCCCGTCTCCACTGGTGGCAGACTTGGCAGATCGGACCGCAGAGTGTCCGGAATTGGGTCCGATCGGGGATCTCCTCACCTCTTCTTCCACCGTTCGAATCACCGCATCAGTATTGGTGATTCAGCAACACGATGTCATTCATAAGGATGAGGTAGCCTTTTCCAAAACCTCATCCCCCCAATTTGGTGACCTGAGCTGCCACGACATCGAAACTGAATGA___GAAGCCAATATGGTCGTTCCTGCCGAGATTCCCTTACCCGTCGAAGTATTTTAAGTTGCGTCTTTCTTATTAAATATTTTGAAGTAGCCAACCAGTCGAGAAAGGTTAATCCTTTCATTGTAAAGTGCTGAATCCCAAGTATAAAGGCCAACTCATTTTCTCACAACCCTGCTTGCTAGTTTTCCTTTATTGTAAAGTGCTGAATCCAAGTATGTAATGTATTGAGCATTGGC

Fln Alignment:

sp_v1.1_unigene63455___PSPLVADLADRTAECPELGPIGDLLTSSSTVRITASVLVIQQHDVIHKDEVAFSKTSS
Q9M353_______________PSAEVAALAERQAEHPELGPIGDVLASSIN-HIIPSILVVQQHNKAHVEDITVSKIVS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain