SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene63402

Length: 386 nt

UniGene Fasta

>sp_v1.1_unigene63402
GGCAATAAAAGCCTGCAATTTGGATTTGTTAACTGCAAATCGATTATATGGATTCCGTCGTTATTTTGGTTGTCTGTCGTTTGGTCAGGCAGAGTACGCAGGCGATGATCAAAGGCCTCAAAAATCATGTTCTGATCAGAAGCAGCAGGTCCTGGGCCAACCAACAATTCCCCCAAGAGTAAGTGTTTTGTGCTTTGCATGCGCTCAACCTCGGTGGGAGAGCGATTGGAACTTCAGTATAGAAGATATGGTGTCCATCGACACCAGCAAGAGCATATTATCATCATTTAAGACAGGAGATTTGATGAAAGAGAAAGTAGGCAAAAGCCAGAAGATGCGCAAGAAGATGGGAAGGGTAATTTATCACAGGCCACCTCGTGCTCTTC

Ace file of the UniGene sp_v1.1_unigene63402

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Late embryogenesis abundant protein (Fragment) n=1 Tax=Picea glauca RepID=Q40843_PICGL	-	-	8.0e-34	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	51%
Blast2go	late embryogenesis abundant protein	-	-	1.50517e-33	71%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: A9NNU1

Fln msg: STOP codon was not found. Distance to subject end: 3 aas, W2: There is no M at the beginning,

Fln protein: AIKACNLDLLTANRLYGFRRYFGCLSFGQAEYAGDDQRPQKSCSDQKQQVLGQPTIPPRVSVLCFACAQPRWESDWNFSIEDMVSIDTSKSILSSFKTGDLMKEKVGKSQKMRKKMGRVIYHRPPRAL

Protein Length: 129

Fln nts: GGCAATAAAAGCCTGCAATTTGGATTTGTTAACTGCAAATCGATTATATGGATTCCGTCGTTATTTTGGTTGTCTGTCGTTTGGTCAGGCAGAGTACGCAGGCGATGATCAAAGGCCTCAAAAATCATGTTCTGATCAGAAGCAGCAGGTCCTGGGCCAACCAACAATTCCCCCAAGAGTAAGTGTTTTGTGCTTTGCATGCGCTCAACCTCGGTGGGAGAGCGATTGGAACTTCAGTATAGAAGATATGGTGTCCATCGACACCAGCAAGAGCATATTATCATCATTTAAGACAGGAGATTTGATGAAAGAGAAAGTAGGCAAAAGCCAGAAGATGCGCAAGAAGATGGGAAGGGTAATTTATCACAGGCCACCTCGTGCTCTTC

Fln Alignment:

sp_v1.1_unigene63402___LSFGQAEYAGDD-----QRPQKSCSDQKQQVLGQPTIPPRVSVLCFACAQPRWESDWNFSIEDMVSIDTSKSILSSFKTGDLMKEKVGKSQKMRKKMGRVIYHRPPRAL
A9NNU1_______________LACDQEEFSGDSGGSIGRGSQKSCTDQKQ-----PIIPPSVSVLCSTCALPRWESDWSFSIEDGVPMNKN-------DRGDLMKDKAGKGQKMRRNKGRVLYRRAPHVL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain