SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene63209

Length: 465 nt

UniGene Fasta

>sp_v1.1_unigene63209
GTGGAGAAAGGAGGAGAGACTGTTTTTCCAGGAGTTAAAGTAGAGAGCAGTAGTGTTCCATGGTGGAATGAGTTATCTAAATGTGGAAGATCTGGCTTATCGGTGAGGCCGAGAATGGGAGATGCTTTGCTCTTTTGGAGCATGAAACCCAATGCTACTTTGGATCCATTGAGTGTTCATGGTAGTTGTCCTGTAATTCAGGGTGATAAGTGGTCAGCTACAAAATGGATGCGTGTTAATAAGTACAATATTTGATTAATGATCACATCGAGGATTCATCTTCCTCAAATTATTTACAAGTTTGCATGCAAGACCTTGGGGCTTAGATTTAGTGATTACTTCCACCTTTAGGCTGAATACATCTTGGATAAGACCGTGTTCTTCTTGTGGGAGGCATAGTTCATTTTGGCCATCTCTTTCTCTCTCTTGGCCGTGCCCATAGAGGAGCCTTATCTTCTCTTCTTC

Ace file of the UniGene sp_v1.1_unigene63209

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative prolyl 4-hydroxylase, alpha subunit n=1 Tax=Cryptomeria japonica RepID=Q1XG55_CRYJA	-	-	5.0e-37	82%
FL-Next	tr=Putative prolyl 4-hydroxylase, alpha subunit; Cryptomeria japonica (Japanese cedar) (Cupressus japonica).	-	-	0.0	82%
Blast2go	prolyl 4- alpha subunit	-	-	8.64973e-37	87%

Source	GOs	Term	Type	e value	Identity
Blast2go	oxidoreductase activity	GO:0016491	Molecular Function	8.64973e-37	87%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: Q1XG55

Fln msg: your sequence is shorter than subject: 85 - 302

Fln protein: VEKGGETVFPGVKVESSSVPWWNELSKCGRSGLSVRPRMGDALLFWSMKPNATLDPLSVHGSCPVIQGDKWSATKWMRVNKYNI*

Protein Length: 86

Fln nts: GTGGAGAAAGGAGGAGAGACTGTTTTTCCAGGAGTTAAAGTAGAGAGCAGTAGTGTTCCATGGTGGAATGAGTTATCTAAATGTGGAAGATCTGGCTTATCGGTGAGGCCGAGAATGGGAGATGCTTTGCTCTTTTGGAGCATGAAACCCAATGCTACTTTGGATCCATTGAGTGTTCATGGTAGTTGTCCTGTAATTCAGGGTGATAAGTGGTCAGCTACAAAATGGATGCGTGTTAATAAGTACAATATTTGA___TTAATGATCACATCGAGGATTCATCTTCCTCAAATTATTTACAAGTTTGCATGCAAGACCTTGGGGCTTAGATTTAGTGATTACTTCCACCTTTAGGCTGAATACATCTTGGATAAGACCGTGTTCTTCTTGTGGGAGGCATAGTTCATTTTGGCCATCTCTTTCTCTCTCTTGGCCGTGCCCATAGAGGAGCCTTATCTTCTCTTCTTC

Fln Alignment:

sp_v1.1_unigene63209___VEKGGETVFPGVKVESSSVPWWNELSKCGRSGLSVRPRMGDALLFWSMKPNATLDPLSVHGSCPVIQGDKWSATKWMRVNKYNI
Q1XG55_______________VEKGGETVFPQSKVNSSSVPWWDELSECGRSGLSVRPKMGDALLFWSVKPDASLDPSSLHGSCPVIQGNKWSATKWMRLNKYSV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain