SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene63126

Length: 436 nt

UniGene Fasta

>sp_v1.1_unigene63126
ATGGGGAGGGGACGGGCGAGAGAAAGCGTTGCTCGACCATGTCCTGCAGACGGCAGAGAGGGGCAACCCTCAGTCTGTTTTGCAGGCCATCGACTCCTATGGCAGGCGCACCAGCTGGCTCATGAACATTGGCGACGATAAGGGCCCCTTTCTCGATTCCGCCCTTGCAAAGTACAATCCTAGGGTTGCCCTCGAGATTGGGACGTACTGCGGTTACTCTGCTGTCAGGATCGCGTCGCAGATGCAGAGGCCGAAGAGTATGCTGCTGGCGGTGGAGATGAGTCCCCTAATTGCCAAATCGCCACACAAATCATCGACCATGCAGTTGGGTGCAGGGCTATCATCCAAGGTGCGAGTAGTGGAAGGAAATTCGACGAGAGACTGGACGCTGTTAAGCAATTTCTGGAAGAGATGGAGGCTAACTTCTTCGATTTCG

Ace file of the UniGene sp_v1.1_unigene63126

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Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Cathechol O-methyltransferase (Fragment) n=5 Tax=Pinus RepID=B0ZR48_PINTA	-	-	100%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	80%
Blast2go	cathechol o-methyltransferase	-	-	73%

Source	ECs	Term	Type	e value	Identity
Blast2go	Catechol O-methyltransferase.	EC:2.1.1.6	-	0.0	73%

Source	KEGGs	Term	Identity
Blast2go	Steroid hormone biosynthesis	00140	73%
Blast2go	Tyrosine metabolism	00350	73%
Blast2go	Betalain biosynthesis	00965	73%
Blast2go	Metabolic pathways	01100	73%

Source	GOs	Term	Type	Identity
Blast2go	response to lipopolysaccharide	GO:0032496	Biological Process	73%
Blast2go	negative regulation of smooth muscle cell proliferation	GO:0048662	Biological Process	73%
Blast2go	estrogen metabolic process	GO:0008210	Biological Process	73%
Blast2go	learning	GO:0007612	Biological Process	73%
Blast2go	response to organic cyclic compound	GO:0014070	Biological Process	73%
Blast2go	positive regulation of homocysteine metabolic process	GO:0050668	Biological Process	73%
Blast2go	female pregnancy	GO:0007565	Biological Process	73%
Blast2go	multicellular organismal reproductive process	GO:0048609	Biological Process	73%
Blast2go	response to drug	GO:0042493	Biological Process	73%
Blast2go	response to pain	GO:0048265	Biological Process	73%
Blast2go	negative regulation of dopamine metabolic process	GO:0045963	Biological Process	73%
Blast2go	catechol O-methyltransferase activity	GO:0016206	Molecular Function	73%
Blast2go	protein binding	GO:0005515	Molecular Function	73%
Blast2go	membrane fraction	GO:0005624	Cellular Component	73%
Blast2go	cytosol	GO:0005829	Cellular Component	73%
Blast2go	soluble fraction	GO:0005625	Cellular Component	73%

Source	InterPros	Term	Type	e value	Identity
Blast2go	O-methyltransferase, family 3	IPR002935	-	0.0	73%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NQ07

Fln msg: Overlapping hits, possible frame ERROR between 367 and 289, Distance to subject end: 81 aas, your sequence is shorter than subject: 145 - 244

Fln protein: WGGDGREKALLDHVLQTAERGNPQSVLQAIDSYGRRTSWLMNIGDDKGPFLDSALAKYNPRVALEIGTYCGYSAVRIASQMQRPKSMLLAVEMSPxxxxxxxxxxxxxxxxxxxxxxxxxxxxFDERLDAVKQFLEEMEANFFDF

Protein Length: 146

Fln nts: ATGGGGAGGGGACGGGCGAGAGAAAGCGTTGCTCGACCATGTCCTGCAGACGGCAGAGAGGGGCAACCCTCAGTCTGTTTTGCAGGCCATCGACTCCTATGGCAGGCGCACCAGCTGGCTCATGAACATTGGCGACGATAAGGGCCCCTTTCTCGATTCCGCCCTTGCAAAGTACAATCCTAGGGTTGCCCTCGAGATTGGGACGTACTGCGGTTACTCTGCTGTCAGGATCGCGTCGCAGATGCAGAGGCCGAAGAGTATGCTGCTGGCGGTGGAGATGAGTCCCxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTCGACGAGAGACTGGACGCTGTTAAGCAATTTCTGGAAGAGATGGAGGCTAACTTCTTCGATTTCG

Fln Alignment:

sp_v1.1_unigene63126___GDGREKALLDHVLQTAERGNPQSVLQAIDSYGRRTSWLMNIGDDKGPFLDSALAKYNPRVALEIGTYCGYSAVRIASQMQRPKSMLLAVEMSPLIAKxxxxxxxxxxxxxxxxxxxxxxxSGRKFDERLDAVKQFLEEMEANFFDF
A9NQ07_______________GDGREKALLDHVLQTAEKGNPQSVLEAIDSYSRRTSWLMNIGDDKGPFLDSALGKYNPRVALEIGTYCGYSAVRIASKMQKSGSKLLAVEMSPLNCQxxxxxxxxxxxxxxxxxxxxxxxG--KFDERLDAVKQFLEEMDAPFFDF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain