SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene63015

Length: 245 nt

UniGene Fasta

>sp_v1.1_unigene63015
TCCATACTCATTGCGGTATAGAGTGTTGAAATTTGTGCAATACCCTGTTCAAAAGCAAGATGAACATGAAATATGGGATGTGGCATCGCCAGCTCGGACCTATTCAAATGTTCCAGCGTTTCCCGTTGCCCATTTTCTCAGGGCTTGCTATCTTTGCAGACGGCAATTAAACCATGGAAAGGACATCTACATGTACAGGGTGACATGGCATTCTGCAGCGAGGAATGCCGCTACCAACAGATTTT

Ace file of the UniGene sp_v1.1_unigene63015

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF581 domain containing protein	-	-	3.0e-11	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	75%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein of unknown function DUF581	IPR007650	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5ABW4

Fln msg: Separated hits, possible frame ERROR between 199 and 202, Distance to subject end: 46 aas, your sequence is shorter than subject: 81 - 243

Fln protein: PYSLRYRVLKFVQYPVQKQDEHEIWDVASPARTYSNVPAFPVAHFLRACYLCRRQLNHGKDIYMYxxDMAFCSEECRYQQI

Protein Length: 82

Fln nts: TCCATACTCATTGCGGTATAGAGTGTTGAAATTTGTGCAATACCCTGTTCAAAAGCAAGATGAACATGAAATATGGGATGTGGCATCGCCAGCTCGGACCTATTCAAATGTTCCAGCGTTTCCCGTTGCCCATTTTCTCAGGGCTTGCTATCTTTGCAGACGGCAATTAAACCATGGAAAGGACATCTACATGTACAGxxxTGACATGGCATTCTGCAGCGAGGAATGCCGCTACCAACAGATTTT

Fln Alignment:

sp_v1.1_unigene63015___AHFLRACYLCRRQLNHGKDIYMYRxDMAFCSEECRYQQI
D5ABW4_______________AHFLRACFFCQRRLGHGRDIYMYRxDRAFCSVECRHQQI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain