SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene61613

Length: 519 nt

Origin of reads: Biogeco_1

UniGene Fasta

>sp_v1.1_unigene61613
ACAGCTCTTGTATGTTGCTTGCTCTTATTCATATGTTGGTTGAGCGTAGGATCGAAAAGGAGAAATAGTAGAGCAGGTGAAGGAGAAGGAGAAGAATCCAGACTTGTTCATTTTGATTACCGGATGATTAGAGAAGCAACCAAAGGCTTTGAGGCTCGAAACAAGCTCGGACAAGGAGGGTTCGGTGAAGTTTATAAGGGAATACTTCGTGATGGTACACCGGTGGCTGTGAAGAAACTCTTTCCAAAGCAATCAAGCCAAGCCGTGATGGAATTCCATACGGAAATTGAAGCCATCAGCGGTGTTCTTCACAGAAATATTCTCCGCCTACTTGGATATTGCACTCACAGACAGAAGCGTTTCCTGGTTTACGAATTCATGCCAAATAGGAGCCTCGACATACACTTGTTTGGGGATAGAGGAATTTTTCTTCCATGGGAAACACGTTTTCAGATCATAACGGGAATATCCCGAGGTCTTGCATATCTGCACGAACATTCTCGGGTTCCCGTTGTGCAC

Ace file of the UniGene sp_v1.1_unigene61613

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP binding protein, putative (EC:2.7.11.25 2.7.10.1)	-	-	5.0e-34	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	47%
Blast2go	atp binding	-	-	5.20378e-35	67%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	5.20378e-35	67%
Blast2go	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	5.20378e-35	67%
Blast2go	Protein kinase-like domain	IPR011009	-	5.20378e-35	67%
Blast2go	Protein kinase, ATP binding site	IPR017441	-	5.20378e-35	67%
Blast2go	Tyrosine-protein kinase, catalytic domain	IPR020635	-	5.20378e-35	67%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLJ5

Fln msg: Distance to subject end: 45 aas, your sequence is shorter than subject: 173 - 505

Fln protein: TALVCCLLLFICWLSVGSKRRNSRAGEGEGEESRLVHFDYRMIREATKGFEARNKLGQGGFGEVYKGILRDGTPVAVKKLFPKQSSQAVMEFHTEIEAISGVLHRNILRLLGYCTHRQKRFLVYEFMPNRSLDIHLFGDRGIFLPWETRFQIITGISRGLAYLHEHSRVPVVH

Protein Length: 174

Fln nts: ACAGCTCTTGTATGTTGCTTGCTCTTATTCATATGTTGGTTGAGCGTAGGATCGAAAAGGAGAAATAGTAGAGCAGGTGAAGGAGAAGGAGAAGAATCCAGACTTGTTCATTTTGATTACCGGATGATTAGAGAAGCAACCAAAGGCTTTGAGGCTCGAAACAAGCTCGGACAAGGAGGGTTCGGTGAAGTTTATAAGGGAATACTTCGTGATGGTACACCGGTGGCTGTGAAGAAACTCTTTCCAAAGCAATCAAGCCAAGCCGTGATGGAATTCCATACGGAAATTGAAGCCATCAGCGGTGTTCTTCACAGAAATATTCTCCGCCTACTTGGATATTGCACTCACAGACAGAAGCGTTTCCTGGTTTACGAATTCATGCCAAATAGGAGCCTCGACATACACTTGTTTGGGGATAGAGGAATTTTTCTTCCATGGGAAACACGTTTTCAGATCATAACGGGAATATCCCGAGGTCTTGCATATCTGCACGAACATTCTCGGGTTCCCGTTGTGCAC

Fln Alignment:

sp_v1.1_unigene61613___FDYRMIREATKGFEARNKLGQGGFGEVYKGILRDGTPVAVKKLFPKQSSQAVMEFHTEIEAISGVLHRNILRLLGYCTHRQKRFLVYEFMPNRSLDIHLFG-DRGIFLPWETRFQIITGISRGLAYLHEHSRVPVVH
B8LLJ5_______________FKYNILKEATFNFKAENKLGEGGFGSVFKGVLPDGREIAVKRL-SIGSRQGDVEFFNEANLISRVQHRNLVKLLGCSVENSERLLVYEYLQNSSLDKIIFDITKRHLLDWRERYEIIVGTARGLAYLHEESEIRIIH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain