SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene61057

Length: 441 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene61057

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Phospholipase A2 n=1 Tax=Nicotiana tabacum RepID=Q5CCT8_TOBAC	-	-	7.0e-24	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	75%
Blast2go	phospholipase a2	-	-	3.76642e-40	63%

Source	ECs	Term	Type	e value	Identity
Blast2go	Phospholipase A(2).	EC:3.1.1.4	-	3.76642e-40	63%

Source	KEGGs	Term	e value	Identity
Blast2go	Glycerophospholipid metabolism	00564	3.76642e-40	63%
Blast2go	Ether lipid metabolism	00565	3.76642e-40	63%
Blast2go	Arachidonic acid metabolism	00590	3.76642e-40	63%
Blast2go	Linoleic acid metabolism	00591	3.76642e-40	63%
Blast2go	alpha-Linolenic acid metabolism	00592	3.76642e-40	63%
Blast2go	Metabolic pathways	01100	3.76642e-40	63%

Source	GOs	Term	Type	e value	Identity
Blast2go	phospholipase A2 activity	GO:0004623	Molecular Function	3.76642e-40	63%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Phospholipase A2, eukaryotic	IPR001211	-	3.76642e-40	63%
Blast2go	Phospholipase A2, active site	IPR013090	-	3.76642e-40	63%
Blast2go	Phospholipase A2	IPR016090	-	3.76642e-40	63%

Full-Lengther Next Prediction

SNPs (tot: 9)

Position	A %	C %	G %	T %	Probability
133		66		33	0.997457
172		66		33	0.997452
175		66	33		0.997452
200			66	33	0.997452
210	33		66		0.997452
212	66	33			0.997452
250	75		25		0.99649
295		66		33	0.997476
296		66	33		0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain