SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene60939

Length: 676 nt

Origin of reads: Biogeco_1

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene60939

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	deoxyhypusine synthase, putative (EC:2.5.1.45); K00809 deoxyhypusine synthase [EC:2.5.1.46]	-	-	71%
FL-Next	sp=Deoxyhypusine synthase; Arabidopsis thaliana (Mouse-ear cress).	-	-	73%
Blast2go	deoxyhypusine synthase	-	-	84%

Source	ECs	Term	Type	e value	Identity
AutoFact	Deoxyhypusine synthase.	EC:2.5.1.46	-	0.0	71%

Source	GOs	Term	Type	Identity
Blast2go	embryo sac development	GO:0009553	Biological Process	84%
Blast2go	senescence	GO:0010149	Biological Process	84%
Blast2go	peptidyl-lysine modification to hypusine	GO:0008612	Biological Process	84%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Deoxyhypusine synthase	IPR002773	-	0.0	84%

Full-Lengther Next Prediction

SNPs (tot: 14)

Position	A %	C %	G %	T %	Probability
129	75	25			0.996476
269	25		25		0.995533
409	83			16	0.994512
413	83		16		0.994512
420			16	83	0.994512
422	83	16			0.994512
423	83			16	0.994512
426	83			16	0.994512
427		16	83		0.994512
428	16		83		0.994512
429		16		83	0.994512
431		16	83		0.994512
432	16	83			0.994512
463		20	80		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain