SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene60759

Length: 430 nt

UniGene Fasta

>sp_v1.1_unigene60759
CGTCGTGACCTTGGCTGTCACTCAAAAGATGTAACACTTCCGGAGGTGAGTTTGGGACGAGGTGGGCTGGCTGGTTTGCTTGGTGGTCCATCTGCTCTAGAGAGGCCTTTGCTTGCATTCTTTGCTGGTGGGAACCATGGACCTGTGAGACCCATTTTGTTTAAGTATTGGAAAAACGGGACTGATGATGATATGCAAGTCCACCGCTATCTTCCCCAGGGTTTGTCATATCTTGAATTTATGAACAAGAGCAGATATTGCCTATGCCCTAGTGGATACGAAGTGGCCAGCCCACGAATCGCAGAGGCAATTTACAGAGAATGTGTGCCCGTCATCATTTCAAAAGCTATGCTCTTCCCTTCAGCGATGTGCTGAATTGGACAAGTTTCTCTGTTCAGGTTCCCCTCTCCTTCGCAGTGAGTGACAGGCC

Ace file of the UniGene sp_v1.1_unigene60759

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Catalytic, putative n=1 Tax=Ricinus communis RepID=B9SRL1_RICCO	-	-	4.0e-36	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	40%
Blast2go	protein	-	-	7.89231e-36	73%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Exostosin-like	IPR004263	-	7.89231e-36	73%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9P1W4

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 78 aas, your sequence is shorter than subject: 125 - 420

Fln protein: RRDLGCHSKDVTLPEVSLGRGGLAGLLGGPSALERPLLAFFAGGNHGPVRPILFKYWKNGTDDDMQVHRYLPQGLSYLEFMNKSRYCLCPSGYEVASPRIAEAIYRECVPVIISKAMLFPSAMC*

Protein Length: 126

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAAAGATGTAACACTTCCGGAGGTGAGTTTGGGACGAGGTGGGCTGGCTGGTTTGCTTGGTGGTCCATCTGCTCTAGAGAGGCCTTTGCTTGCATTCTTTGCTGGTGGGAACCATGGACCTGTGAGACCCATTTTGTTTAAGTATTGGAAAAACGGGACTGATGATGATATGCAAGTCCACCGCTATCTTCCCCAGGGTTTGTCATATCTTGAATTTATGAACAAGAGCAGATATTGCCTATGCCCTAGTGGATACGAAGTGGCCAGCCCACGAATCGCAGAGGCAATTTACAGAGAATGTGTGCCCGTCATCATTTCAAAAGCTATGCTCTTCCCTTCAGCGATGTGCTGAATTGGACAAGTTTCTCTGTTCAGGTTCCCCTCTCCTTCGCAGTGAGTGACAGGCC

Fln Alignment:

sp_v1.1_unigene60759___SYLEFMNKSRYCLCPSGYEVASPRIAEAIYRECVPVIISKAMLFPSA
A9P1W4_______________TYYEDMQRAIFCLCPLGWAPWSPRLVEGVIFGCIPVIIADDIVLPFA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain