SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene60755

Length: 403 nt

Origin of reads: Uagpf Uma

UniGene Fasta

>sp_v1.1_unigene60755
CGTCGTGACCTTGGCTGTCACTCATAATTTTTTGGTAGTTGGAGATTGGGGTAGAAAAGGCCTTTACAACCAGTCTAGAGTGGCTACTCAGATGGGAAGAATAGGAGAGGAGCTGGACATTGACTTCGTCATTTCTACTGGTGATAACTTTTATGACAATGGATTGACTGCCATTGGTGACCCAAGTTTTGAGGAATCGTTTTCTGGAATCTACACAGCCAAAAGCTTGCAGACACCATGGTATAGCGTGTTAGGGAACCATGATTACAGGGGAGATGTGTTAGCTCAGCTCAGTCCCTCTCTGAGAAGCCGAGATCCTCGATGGAACTGTGGAAGGTCATTCGTTCTCAAGTACGACATTTGCCCACATGGGCCTGCATCTGGAGAGCACACTTTTGCAGTA

Ace file of the UniGene sp_v1.1_unigene60755

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Purple acid phosphatase 3 n=3 Tax=Arabidopsis RepID=PPA3_ARATH	-	-	8.96831e-44	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	87%
Blast2go	purple acid phosphatase	-	-	0.0	83%

Source	GOs	Term	Type	Identity
Blast2go	positive regulation of anthocyanin metabolic process	GO:0031539	Biological Process	83%
Blast2go	gibberellic acid mediated signaling pathway	GO:0009740	Biological Process	83%
Blast2go	red or far-red light signaling pathway	GO:0010017	Biological Process	83%
Blast2go	de-etiolation	GO:0009704	Biological Process	83%
Blast2go	identical protein binding	GO:0042802	Molecular Function	83%
Blast2go	DNA binding	GO:0003677	Molecular Function	83%
Blast2go	nucleus	GO:0005634	Cellular Component	83%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Metallophosphoesterase domain	IPR004843	-	0.0	83%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NZW8

Fln msg: Distance to subject end: 173 aas, your sequence is shorter than subject: 134 - 350

Fln protein: VVTLAVTHNFLVVGDWGRKGLYNQSRVATQMGRIGEELDIDFVISTGDNFYDNGLTAIGDPSFEESFSGIYTAKSLQTPWYSVLGNHDYRGDVLAQLSPSLRSRDPRWNCGRSFVLKYDICPHGPASGEHTFAV

Protein Length: 135

Fln nts: CGTCGTGACCTTGGCTGTCACTCATAATTTTTTGGTAGTTGGAGATTGGGGTAGAAAAGGCCTTTACAACCAGTCTAGAGTGGCTACTCAGATGGGAAGAATAGGAGAGGAGCTGGACATTGACTTCGTCATTTCTACTGGTGATAACTTTTATGACAATGGATTGACTGCCATTGGTGACCCAAGTTTTGAGGAATCGTTTTCTGGAATCTACACAGCCAAAAGCTTGCAGACACCATGGTATAGCGTGTTAGGGAACCATGATTACAGGGGAGATGTGTTAGCTCAGCTCAGTCCCTCTCTGAGAAGCCGAGATCCTCGATGGAACTGTGGAAGGTCATTCGTTCTCAAGTACGACATTTGCCCACATGGGCCTGCATCTGGAGAGCACACTTTTGCAGTA

Fln Alignment:

sp_v1.1_unigene60755___NFLVVGDWGRKGLYNQSRVATQMGRIGEELDIDFVISTGDNFYDNGLTAIGDPSFEESFSGIYTAKSLQTPWYSVLGNHDYRGDVLAQLSPSLRSRDPRWNCGRSFVLKYDICPHGPASG
A9NZW8_______________NFLVVGDWGRKGLYNQSRVATQMGRIGEELDIDFVISTGDNFYENGLTGIDDPSFEESFSGIYTAKSLQTPWYSVLGNHDYRGNALAQLSPSLRSQDHRWQCERSFILKYTIYPHDLQSG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain