SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene60697

Length: 612 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene60697

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	kinase, putative (EC:2.7.11.25)	-	-	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	52%
Blast2go	protein	-	-	76%

Source	GOs	Term	Type	e value	Identity
Blast2go	transferase activity	GO:0016740	Molecular Function	0.0	76%
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	76%

Source	InterPros	Term	Type	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	76%
Blast2go	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	76%
Blast2go	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	76%
Blast2go	Serine/threonine-protein kinase, active site	IPR008271	-	76%
Blast2go	Protein kinase-like domain	IPR011009	-	76%
Blast2go	Tyrosine-protein kinase, catalytic domain	IPR020635	-	76%

Full-Lengther Next Prediction

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
237		66	33		0.997476
282	66		33		0.997452
424	33		66		1.0
429		60	40		1.0
448		40		60	1.0
461	40			60	1.0
512	33			66	0.997457
533	66		33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain