SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene60598

Length: 702 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene60598

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	peptidylprolyl isomerase, putative (EC:5.2.1.8); K09571 FK506-binding protein 4/5 [EC:5.2.1.8]	-	-	1.0e-37	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	peptidylprolyl isomerase	-	-	0.0	83%

Source	ECs	Term	Type	e value	Identity
AutoFact	Peptidylprolyl isomerase.	EC:5.2.1.8	-	1.0e-37	68%

Source	GOs	Term	Type	Identity
Blast2go	response to wounding	GO:0009611	Biological Process	83%
Blast2go	response to heat	GO:0009408	Biological Process	83%
Blast2go	protein binding	GO:0005515	Molecular Function	83%
Blast2go	cytoplasm	GO:0005737	Cellular Component	83%
Blast2go	nucleus	GO:0005634	Cellular Component	83%

Full-Lengther Next Prediction

SNPs (tot: 27)

Position	A %	C %	G %	T %	Probability
87	25	75			0.99649
89		25		75	0.99649
90	25	75			0.99649
92	33			66	0.997452
93	33		66		0.997452
95	33	66			0.997452
96	33	66			0.997452
101	25	75			0.996474
109	33	66			0.997452
118		20	80		0.995496
120	80			20	0.995496
121		20	80		0.995496
128	80	20			0.995495
130		75		25	0.996473
132		75	25		0.996473
133	80	20			0.995505
134	80			20	0.995505
135	80		20		0.995505
136	80			20	0.995505
137		25		75	0.996473
138	25		75		0.996473
139		25		75	0.996473
141	75	25			0.996473
334	33	33	33		0.997752
359	66			33	0.997454
360	66			33	0.997454
361	66			33	0.997454

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain