SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene60464

Length: 588 nt

Origin of reads: Biogeco_1 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene60464

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Polyubiquitin n=1 Tax=Volvox carteri f. nagariensis RepID=D8U995_VOLCA	-	-	6.0e-34	83%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	83%
Blast2go	polyubiquitin 2	-	-	1.07765e-33	89%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to UV-B	GO:0010224	Biological Process	1.07765e-33	89%
Blast2go	cellular protein metabolic process	GO:0044267	Biological Process	1.07765e-33	89%
Blast2go	response to salicylic acid stimulus	GO:0009751	Biological Process	1.07765e-33	89%
Blast2go	protein binding	GO:0005515	Molecular Function	1.07765e-33	89%
Blast2go	nucleolus	GO:0005730	Cellular Component	1.07765e-33	89%
Blast2go	vacuole	GO:0005773	Cellular Component	1.07765e-33	89%
Blast2go	cytosolic large ribosomal subunit	GO:0022625	Cellular Component	1.07765e-33	89%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Ubiquitin	IPR000626	-	1.07765e-33	89%
Blast2go	Ubiquitin conserved site	IPR019954	-	1.07765e-33	89%
Blast2go	Ubiquitin supergroup	IPR019955	-	1.07765e-33	89%
Blast2go	Ubiquitin subgroup	IPR019956	-	1.07765e-33	89%

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
423	66		33		0.997454

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain