SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene60383

Length: 1313 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene60383

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Chlorophyllase n=1 Tax=Ginkgo biloba RepID=Q7Y0K5_GINBI	-	-	53%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	79%
Blast2go	chlorophyllase- chloroplast	-	-	68%

Source	ECs	Term	Type	e value	Identity
Blast2go	Chlorophyllase.	EC:3.1.1.14	-	0.0	68%

Source	KEGGs	Term	Identity
Blast2go	Porphyrin and chlorophyll metabolism	00860	68%
Blast2go	Metabolic pathways	01100	68%
Blast2go	Biosynthesis of secondary metabolites	01110	68%

Source	GOs	Term	Type	e value	Identity
Blast2go	chlorophyll catabolic process	GO:0015996	Biological Process	0.0	68%
Blast2go	chlorophyllase activity	GO:0047746	Molecular Function	0.0	68%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Chlorophyllase	IPR010821	-	0.0	68%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LMJ9

Fln msg:

Fln protein: MAGEGEKPWEMVFKAGRFPVEICDTRKLGSTAAPPPKRLLLTFPSQSGEYPVLLLFHGFMIQNTSYTQLLQHVASHGYITVAPQMYILTGENAEPEIDDAEAIFNWLPDGLSYYLPDEVRPDMENVVIAGHSRGGKVAFGSALRLAAQKTKIKLSALVGIDPVDGTGRGQQTKPPILTYKPHAFDLHCPTLVIGSGLGPKWNLLIPPCAPEGVSHREFFNECSSPSYHFVASEFGHMDFLNDDTIPLTFVCKNGVAREPMRKFSGGIMVAFLDACLRNDSEAFDHLLLHPRDAPVILEQPQSFVSKTYKLISKL*

Protein Length: 316

Fln nts: ATGGGAGTATAGCTTTCGGAGGGAGCAACGAAGGCCAGACAGCCTGTATGCTGTAGGTTCCAGAAATATTTGGAGAGCATTATTGTGACGTTTTTAGAATAGAATTAATT_-_ATGGCGGGAGAGGGGGAGAAGCCATGGGAGATGGTTTTCAAAGCAGGGCGGTTCCCAGTTGAAATATGCGACACCAGGAAGCTTGGATCCACCGCAGCACCGCCACCAAAGCGGCTGCTTTTGACGTTCCCCAGCCAAAGTGGAGAGTACCCTGTTCTCCTTTTGTTCCACGGTTTTATGATCCAAAATACCTCCTACACCCAACTTCTCCAGCATGTAGCCTCCCATGGCTACATCACAGTTGCCCCTCAGATGTACATTTTGACGGGAGAGAATGCGGAGCCGGAAATAGACGACGCGGAGGCCATTTTCAACTGGCTACCGGATGGCCTATCTTATTACCTGCCCGACGAGGTCCGGCCAGACATGGAGAATGTTGTTATCGCGGGGCACAGCCGCGGTGGCAAAGTAGCATTCGGTTCGGCCCTCCGTCTAGCTGCGCAGAAAACAAAAATAAAGTTGTCGGCCCTGGTGGGGATAGATCCAGTGGACGGCACGGGCCGTGGCCAGCAAACAAAGCCGCCGATTCTGACTTATAAACCCCACGCCTTTGATCTTCACTGCCCGACCTTAGTGATCGGTTCGGGCCTGGGGCCGAAGTGGAACCTTTTAATCCCTCCCTGCGCTCCTGAGGGAGTAAGCCACCGTGAATTCTTCAATGAGTGCTCCAGCCCATCTTATCATTTCGTGGCGTCAGAGTTCGGACATATGGATTTCTTAAACGACGATACTATACCCCTCACTTTCGTCTGCAAGAACGGGGTGGCGCGGGAACCCATGCGAAAGTTTTCCGGTGGAATTATGGTGGCTTTTCTGGATGCCTGCCTCAGAAATGATTCCGAGGCTTTCGACCACCTTCTCCTGCATCCCAGGGACGCCCCAGTCATACTCGAACAGCCGCAGTCCTTCGTTTCCAAAACTTACAAGCTTATCTCTAAACTTTAG___ATACAGTACTGAAATCTCTGGTGTCTCTGAAAGTTTGAAGGTTGTGTCTTCTTTTTCAACAATGTATTTGCTGCCTCTAAGGCCAGTTGGTGCTTCTAAGATATCCAAGGTTTGCTGTTCTTTTCGAGTATGCCTCATGGACGCCCATAAGTGAAGTGCGGTACAATAAAATCAAGAATAAAGTACCTTCTCTAATGTGAGTCCTTCACTGAAGCGGAGGTCTTGTAGCTTTTAAAAAGTAAAAACATTGTTGATCAC

Fln Alignment:

sp_v1.1_unigene60383___MAGEGEKPWEMVFKAGRFPVEICDTRKLGSTAAPPPKRLLLTFPSQSGEYPVLLLFHGFMIQNTSYTQLLQHVASHGYITVAPQMYILTGENAEPEIDDAEAIFNWLPDGLSYYLPDEVRPDMENVVIAGHSRGGKVAFGSALRLAAQKTKIKLSALVGIDPVDGTGRGQQTKPPILTYKPHAFDLHCPTLVIGSGLGPKWNLLIPPCAPEGVSHREFFNECSSPSYHFVASEFGHMDFLNDDTIPLTFVCKNGVAREPMRKFSGGIMVAFLDACLRNDSEAFDHLLLHPRDAPVILEQPQSFVSKTYKLISKL
B8LMJ9_______________MVQEREKPWEVVFKPGRFPVEIRDTRNHGSTTAPPPKPLLLAFPNQSGDYPIVLCFHGFMIPNSSYTQILHHIASHGYITIAPQMYCITGENSKPEIDDAAAILNWLPEGLSYYLPSEVRPDLEYVAVAGHSRGGKVAFGLALGLASEKTKVKMSALVGIDPVDGRGRGHQTEPPILTYKPHSFDLHIPTLVIGSGLGEKWNLLVPPCAPDGVSHREFFSECSVPSYHFVASEFGHMDFLNDDTGPLTFFCKNGVAREPMRRFSGGIMVAFLHACLRNDSEALNHLLLHPEDAPVTLEPPQSFVTETYKIFSKL

SNPs (tot: 3)

Position	A %	C %	T %	Probability
772	66		33	0.997452
1046		62	37	1.0
1050		87	12	0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain