SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene60207

Length: 231 nt

UniGene Fasta

>sp_v1.1_unigene60207
AGTGGCTGATGGTAATAGAGTTATTGTGCAACAAGTTATTACTCTTTTATCTAGGATAATTGTTGAGCTTTATATAGGCATCATTGTTTGCAATTTTTGCTATTGAGCAGGGCGAATTATCCGAATTCATTGGTATATGTTTACAAGTTCATTCACACATGATGCAATACGCAAATTCTTTGAGAGTCGAAAATATTTTGGCTTGGAATTAGAACAGGTAACCTTTTTCCA

Ace file of the UniGene sp_v1.1_unigene60207

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	OSJNBa0070C17.21 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XLC8_ORYSJ	-	-	2.0e-09	63%
FL-Next	sp=Probable UDP-N-acetylglucosamine pyrophosphorylase; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	61%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: O64765

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 280 aas, your sequence is shorter than subject: 76 - 502

Fln protein: VADGNRVIVQQVITLLSRIIVELYIGIIVCNFCY*AGRIIRIHWYMFTSSFTHDAIRKFFESRKYFGLELEQVTFF

Protein Length: 77

Fln nts: AGTGGCTGATGGTAATAGAGTTATTGTGCAACAAGTTATTACTCTTTTATCTAGGATAATTGTTGAGCTTTATATAGGCATCATTGTTTGCAATTTTTGCTATTGAGCAGGGCGAATTATCCGAATTCATTGGTATATGTTTACAAGTTCATTCACACATGATGCAATACGCAAATTCTTTGAGAGTCGAAAATATTTTGGCTTGGAATTAGAACAGGTAACCTTTTTCCA

Fln Alignment:

sp_v1.1_unigene60207___RIIRIHWYMFTSSFTHDAIRKFFESRKYFGLELEQVTFF
O64765_______________RPVTIQWYIMTSPFTHEPTQKFFKSHKYFGLEPDQVTFF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain