SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene59782

Length: 1336 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene59782

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	CIPK16; CBL-interacting protein kinase 16	-	-	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	91%
Blast2go	serine-threonine kinase	-	-	77%

Source	InterPros	Term	Type	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	77%
Blast2go	NAF domain	IPR004041	-	77%
Blast2go	Protein kinase-like domain	IPR011009	-	77%
Blast2go	Serine/threonine-protein kinase-like domain	IPR017442	-	77%
Blast2go	NAF/FISL domain	IPR018451	-	77%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5A9K4

Fln msg: your sequence is shorter than subject: 335 - 431

Fln protein: RRDLGCHSGN*RRRRSRKYFQQLISAVDFCHSRGVYHRDLKPENLLLDDNGNVKVSDFGLSALPEQFRKDGLLHTTCGTPAYVAPEVITKKGYDGAMADIWSCGVILFVLMAGYLPFQDANLMIMYKKIHKGDYKCPPWFSSEVRRLVLRLLDPNPRTRITVPQLMEVPWFRRDFKRPQTDRDVTVDLLDDVDSAFFVPKPTCLNAFDIISLSPGFNLSGLFKDNTMKQEEESRFTSTQPASNIMSKLEEIASLFRFSFKKSKDFKMKLQGSEEGRKGQLSIDAEIFEVTPSFFMVELRKTGGDTLEYSKFCSQDLRPGLKDIVWTWDSNIQEK*

Protein Length: 336

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGGAAACTGAAGGAGGAGGAGGTCGAGGAAGTATTTTCAGCAACTGATTAGCGCGGTGGATTTCTGCCACAGCCGCGGAGTGTACCACCGGGACTTGAAGCCGGAAAACTTGTTATTAGACGACAACGGGAATGTTAAGGTCTCCGACTTCGGGCTGAGCGCGCTGCCGGAGCAGTTCAGGAAGGACGGCCTTCTGCACACGACGTGCGGCACGCCGGCCTATGTTGCGCCCGAGGTTATCACCAAGAAGGGGTATGACGGTGCCATGGCCGACATTTGGTCATGTGGAGTCATACTGTTCGTGCTCATGGCGGGCTACTTGCCGTTCCAGGACGCGAATCTGATGATCATGTATAAGAAGATCCACAAGGGAGACTACAAGTGCCCGCCCTGGTTTTCCTCCGAAGTCCGCCGGCTCGTCCTCCGGTTGCTAGACCCTAATCCCCGGACGAGGATCACCGTCCCGCAGCTGATGGAGGTCCCCTGGTTCCGCCGGGACTTCAAGCGCCCGCAGACCGATAGAGACGTCACTGTCGATCTCCTCGACGATGTTGATTCTGCGTTTTTCGTACCGAAGCCGACCTGCCTGAACGCCTTCGACATAATCTCCCTCTCGCCGGGGTTCAATCTTTCCGGGCTCTTCAAGGACAATACCATGAAGCAGGAGGAGGAATCGAGGTTCACTTCGACTCAACCGGCGTCGAACATTATGTCGAAGCTGGAGGAGATTGCAAGCCTGTTCCGGTTCAGCTTCAAGAAGTCAAAAGACTTCAAGATGAAGTTGCAGGGATCGGAGGAGGGGCGGAAGGGGCAATTGTCTATTGATGCTGAGATTTTTGAGGTCACTCCCTCATTTTTCATGGTAGAGCTTCGGAAAACCGGCGGGGATACACTGGAGTACAGTAAGTTCTGCAGCCAAGATCTGAGGCCCGGCCTCAAAGACATTGTGTGGACATGGGACAGCAATATTCAGGAGAAATAA___TATCATCATCGTGCTTGTTCAATTTCCATGATCTGATTTGTATCATTGGCATGTTATTTATCTGAGAAAGCAGTGTAGCCAGAATAGAATAAAACTTTCTCCTAGCGAGGACTGCGAGCCATCTTTGAAGCCATGAAACCTTCACGGTGTGGAAGCTAAGTATCACATTAGCTAAGGCCGTAGTGTCAGATGTGTACAGCTTATTTTCTTGTAAATTTGTTAAAACAGATGAAATGTTTTACATTTAAGATTGTTTTGTTAAATTTGTAAAAACAGATTATTTTCTTGTAAATTTGTTAAAACAGATGAAGTGATTTACATTGAAGATTGT

Fln Alignment:

sp_v1.1_unigene59782___GN*RRRRSRKYFQQLISAVDFCHSRGVYHRDLKPENLLLDDNGNVKVSDFGLSALPEQFRKDGLLHTTCGTPAYVAPEVITKKGYDGAMADIWSCGVILFVLMAGYLPFQDANLMIMYKKIHKGDYKCPPWFSSEXXXXXXXXXDPNPRTRITVPQLMEVPWFRRDFKRPQXXXXXXXXXXXXXXSAFFVPKPTCLNAFDIISLSPGFNLSGLFKDNTMKQEEESRFTSTQPASNIMSKLEEIAXXXXXXXXXXXXXXXXLQGSEEGRKGQLSIDAEIFEVTPSFFMVELRKTGGDTLEYSKFCSQDLRPGLKDIVWTWDSNIQEK
D5A9K4_______________GKLKEEEARKYFQQLISAVDFCHSRGVYHRDLKPENLLLDDNGVVKVSDFGLSALPEQFRQDGLLHTACGTPAYVAPEVITKKGYDGATADIWSCGVILFVLMAGYLPFQDANLMVMYKKIYKGDYKCPPWFSSEVRRLVLRLLDPNPRTRITVPQLMEVPWFRRGFKRPQADKDVNVGVLDDVDSAFFVPKPACLNAFDIISLSPGFNLSGLFKDDVLKQEEESRFTSTQPASSIMSKLEEIASLFRFSFKKSKDFKMKLQGSEQGRKGHLSIDAEIFEVTPSFFMVELRKTGGDTLEYSKFCSQDLRPGLKDIVWTWDGNRQEK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain