SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene59715

Length: 580 nt

Origin of reads: Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene59715

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE); chitinase; K01183 chitinase [EC:3.2.1.14]	-	-	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	76%
Blast2go	basic endochitinase	-	-	78%

Source	ECs	Term	Type	e value	Identity
Blast2go	Chitinase.	EC:3.2.1.14	-	0.0	78%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Amino sugar and nucleotide sugar metabolism	00520		0.0	78%

Source	ECs	Term	Type	e value	Identity
AutoFact	Chitinase.	EC:3.2.1.14	-	0.0	63%

Source	KEGGs	Term	Type	e value	Identity
AutoFact	Amino sugar and nucleotide sugar metabolism	00520		0.0	63%

Source	GOs	Term	Type	Identity
Blast2go	jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	GO:0009871	Biological Process	78%
Blast2go	response to cadmium ion	GO:0046686	Biological Process	78%
Blast2go	defense response to fungus	GO:0050832	Biological Process	78%
Blast2go	chitinase activity	GO:0004568	Molecular Function	78%
Blast2go	plasma membrane	GO:0005886	Cellular Component	78%

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
77		33	66		0.997452
79		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain