SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene59511

Length: 928 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene59511 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RALFL22 (ralf-like 22); signal transducer	-	-	2.0e-21	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%
Blast2go	ralf precursor	-	-	0.0	76%

Source	GOs	Term	Type	e value	Identity
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	0.0	76%

Full-Lengther Next Prediction

SNPs (tot: 81)

Position	A %	C %	G %	T %	Probability
438	4	94	2		0.967557
439	2	94	4		0.967557
440		94		6	0.999998
447	5			92	0.99999
448	5		94		0.999997
450	94		5		0.999997
451	94	3		1	0.964041
453		94	5		0.999997
455		96		3	0.993591
463		4		95	0.995482
464	4	2	93		0.976545
465	6			93	0.999998
466		2	4	93	0.976545
468	2	93		4	0.976545
470	4	93	2		0.976545
472			4	95	0.995881
473	4	95			0.995055
474	95	4			0.994598
513		95		4	0.996252
515	4	95			0.996599
516		95	4		0.996599
520	4			95	0.996599
521		4	95		0.996599
523			4	95	0.996599
528	4	2	93		0.983471
529	93	2	4		0.985381
535	95		4		0.997218
536	4			92	0.987114
582		5	94		0.998894
585			94	5	0.998894
637	9	90			0.999842
655	91		8		0.999807
657	91		8		0.999807
659	8	91			0.999807
663		8	91		0.999807
664	8		91		0.999807
666			8	91	0.999807
667	86		8		0.999539
668	90			9	1.0
672	90			3	0.996531
689	9		90		1.0
693	93	6			0.999364
694		6	93		0.999364
699	93		6		0.999153
700			87	12	1.0
701		93	6		0.999153
705	86	6		6	0.995852
706			13	86	1.0
709	8	84		8	0.998474
711	8	64			1.0
712		92	8		0.999718
714	16			83	1.0
717		91	8		0.999766
718		91		8	0.999766
719	8	91			0.999766
721		6	6	86	0.994799
722		86	13		1.0
723	6			93	0.999364
725	93		6		0.999364
726	92		7		0.999532
729		92	7		0.999532
843	91	8			0.999807
846	91		8		0.999807
859	90	9			0.999872
862	5	31			1.0
864	10	25		65	1.0
865		38	61		1.0
867	29		58	5	1.0
868	11			88	0.999952
869	14	14	71		0.999974
870	86		13		0.999973
871		86		13	0.999973
873	16		83		0.999991
874		83	16		0.999991
875		83		16	0.999991
876	83		16		0.999991
877	84		15		0.999986
878			84	15	0.999986
881		84		15	0.999986
885	84		15		0.999986
886		84		15	0.999986

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain