SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene59510

Length: 1445 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene59510

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Allyl alcohol dehydrogenase n=1 Tax=Nicotiana tabacum RepID=Q9SLN8_TOBAC	-	-	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	79%
Blast2go	quinone oxidoreductase-like protein	-	-	78%

Source	ECs	Term	Type	e value	Identity
Blast2go	2-alkenal reductase.	EC:1.3.1.74	-	0.0	78%

Source	GOs	Term	Type	Identity
Blast2go	response to oxidative stress	GO:0006979	Biological Process	78%
Blast2go	2-alkenal reductase [NAD(P)] activity	GO:0032440	Molecular Function	78%
Blast2go	cytosol	GO:0005829	Cellular Component	78%
Blast2go	nucleus	GO:0005634	Cellular Component	78%
Blast2go	plasma membrane	GO:0005886	Cellular Component	78%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9P0J2

Fln msg: your sequence is longer than subject: 422 - 344

Fln protein: MGIHNTICWWCSMGNYLCDYRVGKLQLHCGSCFRLSLNTCGSCFSLSLCCANIVLASFNFTADLAFVCLCVQALSTEMAHNEVDNKQVIFKDYVTGMVKVSDLLLTSKKLPLKLKDGSQDVLVKNLYLSCDPYMRGRMRNISSYISATFTPGSVITGYGVSKVVISNHPDFKEDDLVMGYIGWEEYSIIPGANGLHKIGDTDLPISYYLGVLGMPGFTAYVGFYEVGSPKVGEKVFVSAASGAVGQLVGQFAKLHGCYVVGSAGSKQKVELLKNKLGFDDAFNYKEEPDLTAALKRYLPNGIDIYFENVGGEMLAAVLENMNIHGRIVACGMISQYNLEEGQGIKNLTHVITKRLRIEGFIIPDYWARYPQFVEKVKGYLKEGKITYVEDIAEGLENAPAALVGLFEGKNIGKQVVRVSNE*

Protein Length: 423

Fln nts: _-_ATGGGGATACATAATACTATTTGTTGGTGGTGTTCAATGGGGAACTACTTGTGCGATTATCGTGTTGGCAAGCTTCAACTTCACTGCGGATCTTGCTTTCGTCTGTCTCTTAACACCTGCGGATCTTGCTTTAGTCTGTCTCTGTGTTGTGCGAATATTGTGTTGGCAAGCTTCAACTTCACTGCGGATCTTGCTTTCGTCTGTCTCTGTGTTCAGGCTCTCTCTACTGAAATGGCACATAATGAAGTGGACAATAAGCAAGTTATATTCAAGGATTACGTTACTGGGATGGTCAAGGTGTCTGATTTGTTATTAACATCTAAAAAACTTCCTTTGAAACTGAAAGATGGATCACAAGATGTACTTGTAAAGAATTTGTATTTATCATGTGATCCTTACATGCGGGGCCGCATGAGAAACATATCTTCTTATATTTCAGCTACTTTTACACCTGGATCGGTGATAACTGGCTATGGTGTTTCCAAGGTTGTTATTTCAAATCATCCAGACTTCAAAGAAGATGATTTGGTAATGGGTTATATTGGATGGGAAGAATACAGCATAATACCTGGGGCCAATGGCTTGCACAAGATCGGAGATACGGATCTACCTATCTCATATTATTTGGGAGTTTTAGGAATGCCTGGATTCACAGCGTATGTTGGTTTTTATGAGGTGGGATCTCCTAAAGTGGGTGAAAAGGTTTTCGTTTCTGCAGCTTCTGGAGCAGTTGGACAGCTTGTTGGACAGTTCGCAAAGTTGCATGGGTGTTATGTTGTTGGGAGTGCTGGAAGCAAACAAAAGGTGGAGTTGCTGAAAAATAAACTAGGCTTTGATGATGCATTCAATTACAAGGAGGAACCAGATTTGACAGCTGCCCTTAAGAGGTACTTGCCCAACGGGATTGATATCTATTTTGAGAATGTGGGTGGTGAGATGCTTGCCGCAGTTCTGGAAAATATGAACATCCATGGCCGTATTGTTGCTTGTGGGATGATCTCACAATATAATCTGGAGGAAGGCCAAGGTATTAAAAACTTGACGCATGTGATAACGAAGCGTCTTAGGATAGAAGGCTTCATTATCCCTGATTATTGGGCGAGGTACCCTCAGTTTGTGGAGAAGGTAAAGGGTTACCTAAAAGAAGGAAAAATAACTTACGTCGAAGATATTGCTGAGGGCTTGGAGAATGCACCAGCTGCTCTCGTTGGTTTATTTGAAGGTAAAAACATTGGAAAGCAGGTTGTGCGCGTTAGTAATGAATAA___TGGAAAGTCAAAATAAATGGAATTATGAAGAACTAGATGAGGATTTCAAGTGAGGTGATAGGTCCTTTTTCATTCCATGTTGGGGGAGTTTTGAACGATATGATTTTATTTTAGATTATGTTTAGTAAATGTTGGACATTATTTTATCTAAATAAAATATGGAATTTTATTTCTTTGTC

Fln Alignment:

sp_v1.1_unigene59510___MAHNEVDNKQVIFKDYVTGMVKVSDXXXXXXXXXXXXXDGSQDVLVKNLYLSCDPYMRGRMRNISSYISATFTPGSVITGYGVSKVVISNHPDFKEDDLVMGYIGWEEYSIIPGANGLHKIGDTDLPISYYLGVLGMPGFTAYVGFYEVGSPKVGEKVFVSAASGAVGQLVGQFAKLHGCYVVGSAGSKQKVELLKNKLGFDDAFNYKEEPDLTAALKRYLPNGIDIYFENVGGEMLAAVLENMNIHGRIVACGMISQYNLEEGQGIKNLTHVITKRLRIEGFIIPDYWARYPQFVEKVKGYLKEGKITYVEDIAEGLENAPAALVGLFEGKNIGKQVVRVSNE
A9P0J2_______________MASTEVNNNQVILKDYITGMPKLSHMLLKSTKLPLQLKDGSQDVLAKNLYLSCDPYMRGCMRNLPSYFTPIFTPGSVINGYGVAKVVISNHPDFKEDDLVMGITGWEEYSIIPGGNQLQKIRYTDIPLSYYLGILGMPGLTAYVGFYDLSSPKAGEKVFISAASGAVGQLVGQFAKMHGCYVVGSAGSKQKVELLKDRLGFDDAFNYKEELDLHATLKRYFPNGIDIYFENVGSKMLEAVLENMNLHGRIAACGMISEYNLEEGQGIRNISRVISKRIKIQGFIIHDYWHMYPQFVEKVRGSIKEGKIVYVEDIADGLENAPAAFVGLFEGKNIGKQVVRICDE

SNPs (tot: 12)

Position	A %	C %	G %	T %	Probability
957	90			9	0.999842
1026		11	88		0.999952
1055	94			5	0.998397
1060	94	5			0.998397
1062	94		5		0.998397
1063	94			5	0.998397
1065		2	91		0.993509
1067	94	5			0.998397
1068			94	5	0.998397
1070	5		94		0.998397
1110			92	7	0.999602
1180	78		21		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain