SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene59436

Length: 725 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene59436

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PR4; PR4 (PATHOGENESIS-RELATED 4); chitin binding	-	-	7.0e-31	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	52%
Blast2go	wound-induced protein win2	-	-	5.43938e-35	67%

Source	GOs	Term	Type	e value	Identity
Blast2go	systemic acquired resistance	GO:0009627	Biological Process	5.43938e-35	67%
Blast2go	defense response to fungus, incompatible interaction	GO:0009817	Biological Process	5.43938e-35	67%
Blast2go	response to ethylene stimulus	GO:0009723	Biological Process	5.43938e-35	67%
Blast2go	response to herbivore	GO:0080027	Biological Process	5.43938e-35	67%
Blast2go	response to virus	GO:0009615	Biological Process	5.43938e-35	67%
Blast2go	response to salt stress	GO:0009651	Biological Process	5.43938e-35	67%
Blast2go	protein binding	GO:0005515	Molecular Function	5.43938e-35	67%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Barwin	IPR001153	-	5.43938e-35	67%
Blast2go	Barwin-related endoglucanase	IPR009009	-	5.43938e-35	67%
Blast2go	Barwin-like endoglucanase	IPR014733	-	5.43938e-35	67%
Blast2go	Barwin, conserved site	IPR018226	-	5.43938e-35	67%

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
157			33	66	0.997452
161			33	66	0.997452
240	25	75			0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain