SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene59429

Length: 893 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene59429

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Dtdp-glucose 4-6-dehydratase, putative n=1 Tax=Ricinus communis RepID=B9SN65_RICCO	-	-	85%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	33%
Blast2go	udp-d-apiose udp-d-xylose synthase 1	-	-	92%

Source	ECs	Term	Type	e value	Identity
Blast2go	UDP-glucuronate decarboxylase.	EC:4.1.1.35	-	0.0	92%

Source	KEGGs	Term	Identity
Blast2go	Starch and sucrose metabolism	00500	92%
Blast2go	Amino sugar and nucleotide sugar metabolism	00520	92%
Blast2go	Metabolic pathways	01100	92%

Source	GOs	Term	Type	Identity
Blast2go	nucleotide-sugar biosynthetic process	GO:0009226	Biological Process	92%
Blast2go	UDP-glucuronate decarboxylase activity	GO:0048040	Molecular Function	92%
Blast2go	NAD binding	GO:0051287	Molecular Function	92%

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
515	94			5	0.998397
741		10		90	0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain