SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene59412

Length: 1267 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene59412

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	96%
Blast2go	protein	-	-	82%

Source	GOs	Term	Type	Identity
Blast2go	organ growth	GO:0035265	Biological Process	82%
Blast2go	regulation of cell cycle	GO:0051726	Biological Process	82%
Blast2go	regulation of cell proliferation	GO:0042127	Biological Process	82%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Uncharacterised protein family UPF0434/Trm112	IPR005651	-	0.0	82%

Full-Lengther Next Prediction

SNPs (tot: 26)

Position	A %	C %	G %	T %	Probability
645		83	16		0.994512
646	83		16		0.994512
706		84	7	3	0.99801
709	92			7	0.999664
710		3	88	7	0.999079
712	3		7	88	0.999079
777	92			7	0.999532
829	93	6			0.999153
845	93			6	0.999264
895	88	11			1.0
941	11	88			1.0
997		86		13	1.0
1041	21			78	1.0
1042	76			23	1.0
1083		10		90	0.902983
1085	10		90		0.90298
1086	10			80	0.959698
1087	10			90	0.90298
1137	85			14	0.993533
1178	16	83			0.994512
1179	16			83	0.994512
1180	16	16		66	0.988814
1181		16		83	0.994512
1189	20		80		0.995493
1211	20		80		0.995493
1217	75		25		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain