SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene59368

Length: 789 nt

Origin of reads: Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene59368

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Phi class glutathione transferase n=1 Tax=Cathaya argyrophylla RepID=B8YDC4_9CONI	-	-	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	77%
Blast2go	glutathione s-transferase-like protein	-	-	85%

Source	InterPros	Term	Type	Identity
Blast2go	Glutathione S-transferase, N-terminal	IPR004045	-	85%
Blast2go	Glutathione S-transferase, C-terminal	IPR004046	-	85%
Blast2go	Glutathione S-transferase, C-terminal-like	IPR010987	-	85%
Blast2go	Thioredoxin fold	IPR012335	-	85%
Blast2go	Thioredoxin-like fold	IPR012336	-	85%
Blast2go	Glutathione S-transferase/chloride channel, C-terminal	IPR017933	-	85%

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
271	25			75	0.996473
300	66	33			0.997453
316	33	66			0.997452
325	33		66		0.997453
328	66		33		0.997453
329		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain