SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene59161

Length: 394 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene59161
GGAGTCACAGGGGCACAAACTGCAGGTCCTAGTTCCAAAGGTGGAGCTGACATTCAACCTCTGCAGGTTGATGAGACAGTGAGTTTTGAAGACATTGGTGGTCTCTCTGACTACATTGATGCACTGAAAGAAATGGTCTTCTTCCCTCTTCTCTATCCTGATTTCTTTGCCAATTACCACATCACTCCTCCAAGGGGTGTTTTATTGTGTGGTCCACCTGGAACAGGGAAAACATTAATTGCGAGGGCTTTGGCATGTGCAGCAGCTAAGGCAGGTCAGAAGGTTAACTTCTATATGCGAAAGGGGGCTGATGTACTCAGCAAGTGGGTTGGTGAAGCTGAACGACAATTGAAATTGCTCTTTGAAGAAGCTCAAAGAAATCAACCCTCAATTA

Ace file of the UniGene sp_v1.1_unigene59161

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Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Bromodomain protein n=1 Tax=Populus trichocarpa RepID=B9HH62_POPTR	-	-	86%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	41%
Blast2go	bromodomain protein	-	-	95%

Source	InterPros	Term	Type	e value	Identity
Blast2go	ATPase, AAA-type, core	IPR003959	-	0.0	95%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLX8

Fln msg: Distance to subject end: 164 aas, your sequence is shorter than subject: 131 - 398

Fln protein: GVTGAQTAGPSSKGGADIQPLQVDETVSFEDIGGLSDYIDALKEMVFFPLLYPDFFANYHITPPRGVLLCGPPGTGKTLIARALACAAAKAGQKVNFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSI

Protein Length: 132

Fln nts: GGAGTCACAGGGGCACAAACTGCAGGTCCTAGTTCCAAAGGTGGAGCTGACATTCAACCTCTGCAGGTTGATGAGACAGTGAGTTTTGAAGACATTGGTGGTCTCTCTGACTACATTGATGCACTGAAAGAAATGGTCTTCTTCCCTCTTCTCTATCCTGATTTCTTTGCCAATTACCACATCACTCCTCCAAGGGGTGTTTTATTGTGTGGTCCACCTGGAACAGGGAAAACATTAATTGCGAGGGCTTTGGCATGTGCAGCAGCTAAGGCAGGTCAGAAGGTTAACTTCTATATGCGAAAGGGGGCTGATGTACTCAGCAAGTGGGTTGGTGAAGCTGAACGACAATTGAAATTGCTCTTTGAAGAAGCTCAAAGAAATCAACCCTCAATTA

Fln Alignment:

sp_v1.1_unigene59161___VSFEDIGGLSDYIDALKEMVFFPLLYPDFFANYHITPPRGVLLCGPPGTGKTLIXXXXXXXXXXXGQKVNFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSI
B8LLX8_______________VSYSAVGGLADQIRELRESIELPLMNPELFIRVGIKPPKGVLLYGPPGTGKTLLARAIASNI-----EANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain