SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene59057

Length: 809 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene59057

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	ribisomal protein L13 family protein; K02871 large subunit ribosomal protein L13	-	-	75%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	91%
Blast2go	50s ribosomal protein	-	-	86%

Source	GOs	Term	Type	e value	Identity
Blast2go	intracellular	GO:0005622	Cellular Component	0.0	86%

Full-Lengther Next Prediction

SNPs (tot: 18)

Position	A %	C %	G %	T %	Probability
217			50	50	1.0
219		50	50		1.0
223	50			50	1.0
225	25		50	25	1.0
230		50		50	1.0
231	50		50		1.0
234		33	66		1.0
238		50	50		1.0
241			50	50	1.0
242		50	50		1.0
243	50		50		1.0
333	85	14			0.993533
381			10	90	0.90298
382			10	90	0.90298
438		80		20	0.999999
591	27	72			1.0
618			12	87	0.992554
620			12	87	0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain