SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene59024

Length: 1068 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene59024

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	60S ribosomal protein L11-1 n=56 Tax=Embryophyta RepID=RL111_ARATH	-	-	94%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	99%
Blast2go	60s ribosomal protein l11	-	-	98%

Source	GOs	Term	Type	Identity
Blast2go	nucleolus	GO:0005730	Cellular Component	98%
Blast2go	vacuole	GO:0005773	Cellular Component	98%
Blast2go	cytosolic large ribosomal subunit	GO:0022625	Cellular Component	98%
Blast2go	membrane	GO:0016020	Cellular Component	98%

Source	InterPros	Term	Type	Identity
Blast2go	Ribosomal protein L5	IPR002132	-	98%
Blast2go	Ribosomal protein L5, conserved site	IPR020929	-	98%
Blast2go	Ribosomal protein L5 domain	IPR022803	-	98%

Full-Lengther Next Prediction

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
764	92			7	1.0
765		95	5		0.997749
768	95	5			0.997749
770		7		92	0.999999
772		5		95	0.997749
773	5		95		0.997749
1070			14	85	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain