SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene58936

Length: 775 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene58936

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Obtusifoliol-14-demethylase n=5 Tax=Solanaceae RepID=A0PFU3_PETHY	-	-	79%
FL-Next	sp=Obtusifoliol 14-alpha demethylase; Sorghum bicolor (Sorghum) (Sorghum vulgare).	-	-	71%
Blast2go	obtusifoliol 14-alpha demethylase	-	-	89%

Source	GOs	Term	Type	Identity
Blast2go	sterol biosynthetic process	GO:0016126	Biological Process	89%
Blast2go	binding	GO:0005488	Molecular Function	89%
Blast2go	oxidoreductase activity	GO:0016491	Molecular Function	89%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	89%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cytochrome P450	IPR001128	-	0.0	89%

Full-Lengther Next Prediction

SNPs (tot: 25)

Position	A %	C %	G %	T %	Probability
346		90		10	0.90298
347	90		10		0.90298
353		90		10	0.90298
356	90		10		0.90298
359			10	90	0.90298
360			90	10	0.90298
364	90			10	0.90298
365	90	10			0.90298
413	9	36			1.0
416		18		63	0.999998
431		10	90		0.90298
432	10	90			0.90298
449		14	85		0.999981
450	85		14		0.999981
452		14	85		0.999981
453	85		14		0.999981
454	85			14	0.999981
456	14			85	0.999981
457		14		85	0.999981
461	28		71		1.0
463	85		14		0.999981
464	85	14			0.999981
465			85	14	0.999981
472		71		28	1.0
661	14			85	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain