SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene58829

Length: 721 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene58829

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Chaperone protein dnaJ 11, chloroplast precursor, putative	-	-	2.0e-16	36%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	66%
Blast2go	chaperone protein dnaj chloroplast	-	-	2.76082e-39	57%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to stress	GO:0006950	Biological Process	2.76082e-39	57%
Blast2go	nucleus	GO:0005634	Cellular Component	2.76082e-39	57%

Full-Lengther Next Prediction

SNPs (tot: 19)

Position	A %	C %	G %	T %	Probability
196		80	20		0.995493
197		20		80	0.995493
260	20		80		0.995493
262	80	20			0.995493
282	20		80		0.995493
298	20		80		0.995493
310	80			20	0.995493
319			20	80	0.995493
334			80	20	0.995493
343		80	20		0.995493
349		20	80		0.995493
390	80		20		0.995493
409			25	75	0.996473
496		33	66		0.997452
503	33	66			0.997452
505		33	66		0.997452
510		33		66	0.997452
514		33		66	0.997452
516		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain