SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene58718

Length: 1174 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene58718

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Ubiquitin n=49 Tax=Eukaryota RepID=UBQ10_ARATH	-	-	100%
FL-Next	sp=Polyubiquitin; Pisum sativum (Garden pea).	-	-	100%
Blast2go	polyubiquitin	-	-	99%

Source	GOs	Term	Type	Identity
Blast2go	response to UV-B	GO:0010224	Biological Process	99%
Blast2go	response to salicylic acid stimulus	GO:0009751	Biological Process	99%
Blast2go	protein modification process	GO:0006464	Biological Process	99%
Blast2go	protein binding	GO:0005515	Molecular Function	99%
Blast2go	nucleolus	GO:0005730	Cellular Component	99%
Blast2go	vacuole	GO:0005773	Cellular Component	99%
Blast2go	cytosolic large ribosomal subunit	GO:0022625	Cellular Component	99%

Source	InterPros	Term	Type	Identity
Blast2go	Ubiquitin	IPR000626	-	99%
Blast2go	Ubiquitin conserved site	IPR019954	-	99%
Blast2go	Ubiquitin supergroup	IPR019955	-	99%
Blast2go	Ubiquitin subgroup	IPR019956	-	99%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: P69322

Fln msg: your sequence is shorter than subject: 330 - 381

Fln protein: MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSTPLTM*

Protein Length: 331

Fln nts: CTTCTATAAATACGTCGTGACCTTGGCTGTCACTCATGGGGATATTTTCTCTGGCTTTTGCGAATTCTGATAAGTTCAGCTATTTTTTCTGAAACAGGTCTTCAGTAGTGTTGTTACGCTTTCAAG_-_ATGCAGATCTTTGTCAAAACTCTTACCGGCAAGACCATCACTCTTGAAGTCGAGAGCTCTGACACCATTGACAATGTAAAGGCAAAAATCCAGGACAAGGAAGGCATTCCCCCTGACCAACAGCGTTTGATATTTGCTGGAAAGCAGCTGGAAGATGGCCGAACCCTTGCCGATTACAATATCCAGAAGGAATCCACGCTGCATCTTGTCCTCCGTCTGAGGGGTGGCATGCAGATTTTCGTCAAAACCCTGACCGGTAAGACGATAACGTTGGAAGTTGAGAGCTCGGATACCATTGACAATGTAAAAGCCAAGATCCAGGACAAGGAAGGAATCCCGCCTGACCAGCAGCGTCTGATATTTGCCGGAAAGCAGCTCGAAGACGGCCGAACACTGGCAGACTACAATATTCAAAAGGAATCAACCCTGCATCTCGTCCTCCGTTTGAGGGGTGGTATGCAGATTTTTGTTAAAACCCTCACTGGAAAGACGATCACTTTGGAAGTTGAGAGCTCGGATACCATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCTGACCAGCAGCGTTTAATCTTTGCCGGAAAGCAGCTCGAGGACGGGAGAACTCTTGCCGATTACAACATCCAGAAAGAATCCACCTTGCACCTTGTCCTCCGTCTGAGGGGTGGCATGCAGATCTTTGTCAAAACCCTAACTGGTAAGACGATTACTTTGGAAGTTGAGAGCTCGGACACCATCGATAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCGCCAGACCAGCAGAGGCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGTAGGACCTTGGCTGACTACAACATTCAAAAGGAGTCAACCCTGCATCTGGTGCTTCGTCTAAGAGGAGGGATGCAGATCTTTGTAAAAACCCTTACAGGTAAAACAATTACTCTGGAAGTGGAAAGCTCGACACCATTGACAATGTGA___AGACTAAGATCCAGGACAAGGAGGGCATCCCACCTAAGGAACTTAAATAAATTAAAAG

Fln Alignment:

sp_v1.1_unigene58718___MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE
P69322_______________MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain