SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene58714

Length: 929 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene58714

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	MBF1C; MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C); DNA binding / transcription coactivator/ transcription factor; K03627 putative transcription factor	-	-	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	95%
Blast2go	protein	-	-	79%

Source	GOs	Term	Type	Identity
Blast2go	response to water deprivation	GO:0009414	Biological Process	79%
Blast2go	response to heat	GO:0009408	Biological Process	79%
Blast2go	response to abscisic acid stimulus	GO:0009737	Biological Process	79%
Blast2go	transcription coactivator activity	GO:0003713	Molecular Function	79%
Blast2go	nucleolus	GO:0005730	Cellular Component	79%

Source	InterPros	Term	Type	Identity
Blast2go	Helix-turn-helix type 3	IPR001387	-	79%
Blast2go	Lambda repressor-like, DNA-binding	IPR010982	-	79%
Blast2go	Multiprotein bridging factor 1, N-terminal	IPR013729	-	79%

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
545		10	89		0.999919
546			89	10	0.999919
548	10	89			0.999919

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain