SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene58692

Length: 786 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene58692

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cyclin-dependent kinases regulatory subunit, putative; K02219 cyclin-dependent kinase regulatory subunit CKS1	-	-	6.0e-34	91%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	98%
Blast2go	cyclin-dependent kinases regulatory subunit	-	-	3.08593e-37	94%

Source	GOs	Term	Type	e value	Identity
Blast2go	mitotic cell cycle	GO:0000278	Biological Process	3.08593e-37	94%
Blast2go	DNA endoreduplication	GO:0042023	Biological Process	3.08593e-37	94%
Blast2go	regulation of cell cycle	GO:0051726	Biological Process	3.08593e-37	94%
Blast2go	protein binding	GO:0005515	Molecular Function	3.08593e-37	94%
Blast2go	cytoplasm	GO:0005737	Cellular Component	3.08593e-37	94%

Full-Lengther Next Prediction

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
365	90			9	0.999872
487	25		75		1.0
575		36	63		1.0
619	40		60		1.0
645		33		66	1.0
654	63		36		1.0
684		62		37	1.0
713		33		66	1.0
719		80	20		0.995493
720	20			80	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain