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Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NM48

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 21 aas, your sequence is shorter than subject: 187 - 338

Test code: 0

Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.

Fln protein: SGKEVMEDTHNVTTNILGDDKQAFFGVYDGHGGRRAADFVAEKLGQKIVDLMLKSEKEDCEIEQAVKAGYLETDKEFLEQGVSSGACCVTALIKNGCLVVANAGDCRAVLSRNGKAESITCDHRPGRQEERERIENLGGYVDIHGGAWRVQGTLAVSRSIGDLHLKQWISAEPEIRKLPITSDSEF*

Protein Length: 188

Fln nts: GTTCTGGGAAGGAAGTAATGGAAGACACCCACAACGTGACTACAAATATACTTGGTGATGATAAGCAGGCTTTCTTTGGTGTGTATGACGGACACGGAGGTCGTAGAGCTGCTGATTTTGTTGCTGAGAAACTTGGACAAAAGATTGTGGATTTGATGCTCAAGTCAGAGAAAGAAGATTGTGAGATAGAGCAGGCAGTTAAAGCTGGGTACTTGGAAACAGATAAAGAATTTTTGGAGCAGGGTGTAAGTAGTGGGGCTTGTTGTGTGACTGCCTTGATTAAAAATGGTTGCTTAGTTGTGGCCAATGCGGGTGACTGCCGGGCAGTTCTCAGCAGGAATGGTAAGGCTGAATCAATTACCTGTGATCATAGACCTGGAAGGCAGGAAGAGAGGGAGAGGATTGAGAATCTGGGTGGTTACGTGGATATTCACGGGGGAGCTTGGCGAGTACAGGGAACCTTAGCTGTGTCGAGAAGCATAGGAGATTTACACTTGAAACAGTGGATATCAGCAGAACCAGAGATTAGAAAGCTGCCCATTACATCTGACTCTGAGTTTTGATAATGGCATCTGATGGACTTTGGGAGAAGGTCACTAATCAGGAGGCAGTAGATATTGTCAGGACTTTTCGCACAGAAGAAAAGCAAGGAGCTATTAGCCCTCCTGAACTTTTCGAAGAAGGAGAAGCATGGAATGAGAATGCCAGCCCACCACCTAAAGCAAGGAAA

Fln Alignment:

sp_v1.1_unigene58601___KEVMEDTHNVTTNILGDDKQAFFGVYDGHGGRRAADFVAEKLGQKIVDLMLKSEKEDCEI-EQAVKAGYLETDKEFLEQGVSSGACCVTALIKNGCLVVANAGDCRAVLSRNGKAESITCDHRPGRQEERERIENLGGYVDIHGGAWRVQGTLAVSRSIGDLHLKQWISAEPEIRKLPITSDSEF
A9NM48_______________REFMEDTHQAMVNVLGDSKQAFFGVFDGHSGRTAAAFAAENIGQNIVDAMLGMEDETGDILEQAVRAGYLTTDAEFLKLEVGSGTCCVTALIINGNLVVSNAGDCRAVISRDGVSEALTCDHRAGREDERQRIENLSGIVDLHHGVWRVQGSLAVSRAIGDLHMKEWITAEPDTRKIEITSDCEF