SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene58548

Length: 903 nt

Origin of reads: Biogeco_2 Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene58548 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cytochrome P450 720B2 n=1 Tax=Pinus taeda RepID=C72B2_PINTA	-	-	8.96831e-44	81%
FL-Next	tr=CYP720B2; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%
Blast2go	c72b2_pinta ame: full=cytochrome p450 720b2 ame: full=cytochrome p450 cypb	-	-	5.60519e-45	77%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cytochrome P450	IPR001128	-	5.60519e-45	77%
Blast2go	Cytochrome P450, E-class, group I	IPR002401	-	5.60519e-45	77%
Blast2go	Cytochrome P450, conserved site	IPR017972	-	5.60519e-45	77%

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
166		83	16		0.994512
188		50		50	1.0
224	42		57		1.0
227		87		12	0.992557
268	83			16	0.994512
346	33			50	1.0
347	50		50		1.0
540		75		25	0.996473
714	25	75			0.996473
715	25			75	0.996473
716		25		75	0.996473
717			75	25	0.996473
718			75	25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain