SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene58513

Length: 1301 nt

Origin of reads: Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene58513

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	63%
Blast2go	uncharacterized protein	-	-	66%

Source	GOs	Term	Type	e value	Identity
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	66%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: B9RCP8

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 400 - 934

Fln protein: MGSVHPGKSL*LSRAWNCWC*PCQLL*CYPKHASK*KICLSQP*FTCR*L*CPQF*VSFW***TGFASTPSCKASYSCGQER*NN*SLLCSRFERARS*FFANNFA*HN*LGGSGSL*RQFK*Y*RVLRT*FSNINGSFPTS*AFGYSSPSEMINKALQEKTVVSRHQKRANSGNSNHAEKTFDLNDTKIVKKRTGAVSPPHTYSSLGNSKDTMERERQEVLSKESSRNWNTAITGFLKKSIRDLKRSNQGSEALRPKVSINCRPIADHLVKKAEEHAGPIHPGDYWYDYQAGFWGLMGGPCLSMIPPFIDEFNYPMPTDCAAGKTRVFVNGRELHQKDLDLLAGRGLPTTKDKSYHVEISGRVVDKDTNKELKSLGKLAPTLEKTGRGFGMRVPGKKS*

Protein Length: 401

Fln nts: ATGGGCTCGGTACATCCAGGGAAATCCTTGTGACTGTCAAGAGCATGGAACTGTTGGTGCTAACCATGTCAGCTCTTGTAATGCTATCCAAAACATGCTAGCAAATGAAAGATATGTCTATCACAGCCCTGATTCACATGTAGATGATTATGATGTCCCCAATTCTAAGTCTCATTCTGGTAGTAGTAAACTGGGTTTGCTTCCACCCCTTCCTGCAAAGCTTCATACTCCTGTGGCCAGGAAAGATGAAATAATTGAAGTTTGTTATGTTCAAGATTTGAGAGGGCAAGATCATGATTCTTTGCCAATAACTTCGCATGACACAACTAGCTCGGAGGCTCTGGATCTCTCTAGAGACAATTCAAATAGTACTGAAGGGTACTCAGGACCTGATTTAGCAACATCAATGGCAGTTTCCCCACTTCATGAGCTTTTGGGTACTCTTCACCTTCAGAGATGATAAACAAGGCTCTTCAAGAGAAAACTGTTGTTTCCAGGCATCAAAAGAGGGCCAACTCAGGAAATTCCAACCATGCTGAGAAGACTTTTGATTTGAATGATACAAAGATAGTAAAGAAACGAACCGGGGCAGTTTCACCACCTCACACATATTCAAGCTTGGGAAAtTCCAAAGACACCATGGAAAGAGAACGGCAAGAAGTTCTGTCAAAAGAATCAAGTAGGAACTGGAACACTGCCATCACAGGATTTCTCAAGAAGAGCATCAGAGATTTGAAAAGAAGTAATCAAGGGTCAGAGGCTCTCAGGCCAAAAGTCTCAATCAATTGTAGGCCTATAGCTGACCATTTGGTTAAGAAGGCTGAGGAACATGCTGGACCAATTCATCCTGGAGATTACTGGTATGACTACCAAGCTGGTTTTTGGGGTCTCATGGGTGGGCCATGTCTTAGCATGATACCACCTTTCATAGATGAGTTCAATTATCCCATGCCGACGGACTGTGCTGCTGGAAAAACTCGTGTTTTCGTAAATGGTAGGGAGCTCCATCAAAAAGACTTGGATTTGCTTGCTGGCAGAGGTCTACCAACCACAAAAGACAAGTCTTACCACGTTGAGATCAGCGGAAGAGTTGTGGATAAGGATACTAATAAAGAGCTGAAGAGTCTTGGCAAGCTTGCACCAACGCTTGAGAAAACAGGTCGTGGATTTGGTATGCGTGTCCCCGGGAAAAAATCGTAA___CTGATAACCATGTTGGAGCAGTCATAGTATGGACAGAGTGAGGCATGTTCCCTTGAGAGCGTGACAAGATAGGGAGGAGAGGTATATTTTGGCTATATTGG

Fln Alignment:

sp_v1.1_unigene58513___SKDTMERERQEVLSKESSRNWNTAITGFLKKSIRDLKRSNQGSEALRPKVSINCRPIADHLVKKAEEHAGPIHPGDYWYDYQAGFWGLMGGPCLSMIPPFIDEFNYPMPTDCAAGKTRVFVNGRELHQKDLDLLAGRGLPTTKDKSYHVEISGRVVDKDTNKELKSLGKLAPTLEKTGRGFGMRVPGK
B9RCP8_______________SQDSLEVSKED-LQPRINKGSESFLVGLLKKSFRDFSRSNQHNEYEKPNVFVNGQPIPDSMVKKAEKLAGPIHPGDYWYDSQAGFWGLMGQPCLGIIPPCIKEFNYPMPENCSLGNTSVFVNGRELHQKDLDLLKSRGLPTTKEKFYIIEISGRVFEKDSGKELKSLGKLAPTVEKMKRGFGMKVPRK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain