SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene58431

Length: 717 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene58431

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RDR905; rna-dependent RNA polymerase	-	-	3.0e-23	51%
FL-Next	sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	52%
Blast2go	rna-dependent rna polymerase	-	-	2.00305e-24	70%

Source	GOs	Term	Type	e value	Identity
Blast2go	carpel development	GO:0048440	Biological Process	2.00305e-24	70%
Blast2go	production of miRNAs involved in gene silencing by miRNA	GO:0035196	Biological Process	2.00305e-24	70%
Blast2go	virus induced gene silencing	GO:0009616	Biological Process	2.00305e-24	70%
Blast2go	production of ta-siRNAs involved in RNA interference	GO:0010267	Biological Process	2.00305e-24	70%
Blast2go	leaf development	GO:0048366	Biological Process	2.00305e-24	70%
Blast2go	recognition of pollen	GO:0048544	Biological Process	2.00305e-24	70%
Blast2go	nucleus	GO:0005634	Cellular Component	2.00305e-24	70%

Full-Lengther Next Prediction

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain