SustainPineDB

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Assembly info
Unigenes
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene57411

Length: 471 nt

UniGene Fasta

>sp_v1.1_unigene57411
ATGGGGGGTGCGCCCAATCTTCTCCTTCCTTCACAGCTATCATTCCGTGTAGGATGCAACCGACCGATTGGCGTTTTGGGTACTACTTGAGAAATACAAGGATGCCTGCATCGTCTGATGACGAGAACATGAAGCTCAACAAGAAGACCATTATGGGGATAGAAGAAATAAGGGCTCTCAGGGTGCTCGGCCGAGGGGCAACTGGCACGGTGTTTATGGTTGTAAGAGAGGGTTGGGATCATCCCTTTGCTCTCAAGGTTATAACCAAAGCTGAAAATGGATCAAGCCAAGACGTAGGGTTTAATCGAACGAGAAATATAGCGAGGGAGGGGAGATTCTCGCCTGCTTACAACATCCCTTCCTCCCATCTCTAATTGCCCATGTTGAAACGGACAAGATTGTTGGTTGGGGCGTCGAGTGCTGTCCCGGAGGCGATCTCCATCGTCTCAGACAAACTCAGCCGGAGAAGAC

Ace file of the UniGene sp_v1.1_unigene57411

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	D6PKL1; D6PKL1 (D6 PROTEIN KINASE LIKE 1); kinase	-	-	6.0e-12	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	60%
Blast2go	protein kinase	-	-	1.28814e-12	67%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	1.28814e-12	67%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LKY3

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 293 aas, your sequence is shorter than subject: 156 - 545

Fln protein: WGVRPIFSFLHSYHSV*DATDRLAFWVLLEKYKDACIV**REHEAQQEDHYGDRRNKGSQGARPRGNWHGVYGCKRGLGSSLCSQGYNQS*KWIKPRRRV*SNEKYSEGGEILACLQHPFLPSLIAHVETDKIVGWGVECCPGGDLHRLRQTQPEK

Protein Length: 157

Fln nts: ATGGGGGGTGCGCCCAATCTTCTCCTTCCTTCACAGCTATCATTCCGTGTAGGATGCAACCGACCGATTGGCGTTTTGGGTACTACTTGAGAAATACAAGGATGCCTGCATCGTCTGATGACGAGAACATGAAGCTCAACAAGAAGACCATTATGGGGATAGAAGAAATAAGGGCTCTCAGGGTGCTCGGCCGAGGGGCAACTGGCACGGTGTTTATGGTTGTAAGAGAGGGTTGGGATCATCCCTTTGCTCTCAAGGTTATAACCAAAGCTGAAAATGGATCAAGCCAAGACGTAGGGTTTAATCGAACGAGAAATATAGCGAGGGAGGGGAGATTCTCGCCTGCTTACAACATCCCTTCCTCCCATCTCTAATTGCCCATGTTGAAACGGACAAGATTGTTGGTTGGGGCGTCGAGTGCTGTCCCGGAGGCGATCTCCATCGTCTCAGACAAACTCAGCCGGAGAAGAC

Fln Alignment:

sp_v1.1_unigene57411___EILACLQHPFLPSLIAHVETDKIVGWGVECCPGGDLHRLRQTQPEK
B8LKY3_______________EILSCLDHPFLPTLYSHFETDKFSCLVMEFCSGGDLHSFRQQQPWK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain