SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene56894

Length: 493 nt

UniGene Fasta

>sp_v1.1_unigene56894
ATGGGGAAATATCATACTAAAGTTAACTGAACAGCTAGGGTTTTGTTTTTCATCGTAACAATATCAAAACTTTGTGAATAACTTACTGTTTATCTGGTCACAGATATAATGGATCGTTTGACACTTCTCAGAGGAAAAGGCATGCCATCACTTTTCTCATGGTCATGCAAAAGGAGCTATAAAAATGGTTATGTCTGGAACGATTTATCGGAGGACGATGTAGTCTGTCCATCTCGTGGAGTTGAATATGTTCTCAAGGGTTCAGAGTTGTTTGAGGGTTGTTCAGAAAAGTACCAAGGAAGCACAGGCAGCAAGCCACCCATGGTTTGGCATGCTAATTCTGAAGGAGCAATGATGGTTCATTCTCTGGATTATACACCCTTGGTTAGTGCCAAACCACCTGCAGTTCCTAGACGCAGCTTAAAGATTGAAGCAGCTGAAGATTTGCAAGACAAAAGCCTACAGTAACGGAATGCCTCCTGATGTCCAGTTT

Ace file of the UniGene sp_v1.1_unigene56894

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF966 domain containing protein	-	-	6.0e-34	56%
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	67%
Blast2go	auxin-regulated protein	-	-	8.83345e-26	82%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein of unknown function DUF966	IPR010369	-	8.83345e-26	82%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9T4H1

Fln msg: Unexpected stop codon in the beginning of your sequence, Unexpected STOP codon at 3' end. Distance to subject end: 231 aas, your sequence is shorter than subject: 156 - 427

Fln protein: MGKYHTKVN*TARVLFFIVTISKLCE*LTVYLVTDIMDRLTLLRGKGMPSLFSWSCKRSYKNGYVWNDLSEDDVVCPSRGVEYVLKGSELFEGCSEKYQGSTGSKPPMVWHANSEGAMMVHSLDYTPLVSAKPPAVPRRSLKIEAAEDLQDKSLQ*

Protein Length: 157

Fln nts: ATGGGGAAATATCATACTAAAGTTAACTGAACAGCTAGGGTTTTGTTTTTCATCGTAACAATATCAAAACTTTGTGAATAACTTACTGTTTATCTGGTCACAGATATAATGGATCGTTTGACACTTCTCAGAGGAAAAGGCATGCCATCACTTTTCTCATGGTCATGCAAAAGGAGCTATAAAAATGGTTATGTCTGGAACGATTTATCGGAGGACGATGTAGTCTGTCCATCTCGTGGAGTTGAATATGTTCTCAAGGGTTCAGAGTTGTTTGAGGGTTGTTCAGAAAAGTACCAAGGAAGCACAGGCAGCAAGCCACCCATGGTTTGGCATGCTAATTCTGAAGGAGCAATGATGGTTCATTCTCTGGATTATACACCCTTGGTTAGTGCCAAACCACCTGCAGTTCCTAGACGCAGCTTAAAGATTGAAGCAGCTGAAGATTTGCAAGACAAAAGCCTACAGTAACGGAATGCCTCCTGATGTCCAGTTT

Fln Alignment:

sp_v1.1_unigene56894___DIMDRLTLLRGKGMPSLFSWSCKRSYKNGYVWNDLSEDDVVCPSRGVEYVLKGSELFEGCSEKYQ--GSTGSKPPMVWHAN
B9T4H1_______________DVMDRLTVLRGKGMPSLYSWSCKRSYKNGYVWNDLAENDIIYPSDGAEYVLKGSELVEGCSERLQQLQVTNNNRPLIQELN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain