SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene56815

Length: 232 nt

UniGene Fasta

>sp_v1.1_unigene56815
TTACGTGCAAGGAAGAAAAAAAGTGATGCAAGAGAAATTCAGGCCTATTATCAGGAATACTATGGGAACTATGTTAAGAAGCTTGCTCAAACAGCTGAACAAGCAGATCGTTCGGAACTGGCAAAAGCATATCAAACCGCTAATATACTGTTTGAAGTGTTGAGGGCAGTCACTCAAACAGAAGCCGTTGAAGTAGCTCCCGAGATTCTGGCAACTGGTCAAGATGTCAAGG

Ace file of the UniGene sp_v1.1_unigene56815

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Glucan synthase like 4 n=2 Tax=Selaginella moellendorffii RepID=D8RVJ5_SELML	-	-	2.0e-18	64%
FL-Next	sp=Callose synthase 1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	58%
Blast2go	glucan synthase like 4	-	-	3.06314e-18	77%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9AUE0

Fln msg: Distance to subject end: 1773 aas, your sequence is shorter than subject: 77 - 1950

Fln protein: LRARKKKSDAREIQAYYQEYYGNYVKKLAQTAEQADRSELAKAYQTANILFEVLRAVTQTEAVEVAPEILATGQDVK

Protein Length: 78

Fln nts: TTACGTGCAAGGAAGAAAAAAAGTGATGCAAGAGAAATTCAGGCCTATTATCAGGAATACTATGGGAACTATGTTAAGAAGCTTGCTCAAACAGCTGAACAAGCAGATCGTTCGGAACTGGCAAAAGCATATCAAACCGCTAATATACTGTTTGAAGTGTTGAGGGCAGTCACTCAAACAGAAGCCGTTGAAGTAGCTCCCGAGATTCTGGCAACTGGTCAAGATGTCAAGG

Fln Alignment:

sp_v1.1_unigene56815___ARKKKSDAREIQAYYQEYYGNYVKKLAQTAEQADRSELAKAYQTANILFEVLRAVTQTEAVEVAPEILATGQDVK
Q9AUE0_______________AGRQKSDAREMQSFYQHYYKKYIQALLNAADKADRAQLTKAYQTAAVLFEVLKAVNQTEDVEVADEILETHNKVE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain